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To add a new permission to Android modify the frameworks/base/core/res/AndroidManifest.xml file. Make sure you add the strings too. After rebuilding check that the api/current.txt file was updated to include the new permissions.
 
    <!-- Allows an application to write the company system settings. -->
    <permission android:name="android.permission.WRITE_COMPANY_SETTINGS"
        android:permissionGroup="android.permission-group.DEVELOPMENT_TOOLS"
        android:protectionLevel="signature|system|development"
        android:label="@string/permlab_writeCompanySettings"
        android:description="@string/permdesc_writeCompanySettings" />
    
    <!-- Allows an application to read the company system settings. -->
    <permission android:name="android.permission.READ_COMPANY_SETTINGS"
        android:permissionGroup="android.permission-group.DEVELOPMENT_TOOLS"
        android:protectionLevel="signature|system|development"
        android:label="@string/permlab_readCompanySettings"
        android:description="@string/permdesc_readCompanySettings" />