git-of-theseus install on Windows with ubuntu bash
Because there are so much crap to install that you discover one by one thanks to SO, here it is:
sudo apt-get build-dep python-matplotlib
sudo apt-get install python-pip libpng-dev libfreetype6-dev pkg-config python-dev libblas-dev liblapack-dev libatlas-base-dev gfortran scipy python-tk
sudo pip install smmap git
Then you got this error, and you must edit this file:
_tkinter.TclError: no display name and no $DISPLAY environment variable
$ nano /usr/local/lib/python2.7/dist-packages/matplotlib/mpl-data/matplotlibrc
backend: Agg
Done!
$ python analyze.py .
$ python stack_plot.py cohorts.json
$ python survival_plot.py survival.json