drosofff
11/16/2016 - 4:48 PM

One inline command to extract sequences from UCSC tables twoBitToFa must be installed

One inline command to extract sequences from UCSC tables twoBitToFa must be installed

./twoBitToFa http://hgdownload.cse.ucsc.edu/gbdb/hg19/hg19.2bit stdout -seq=chr22 -start=23288654 -end=23294365 > BCR_region.fa