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Warning: The system curl on 10.6 and below is often incapable of supporting
modern secure connections & will fail on fetching formulae.
We recommend you:
  brew install curl
Warning: "config" scripts exist outside your system or Homebrew directories.
`./configure` scripts often look for *-config scripts to determine if
software packages are installed, and what additional flags to use when
compiling and linking.

Having additional scripts in your path can confuse software installed via
Homebrew if the config script overrides a system or Homebrew provided
script of the same name. We found the following "config" scripts:
    /opt/python/x64/python-3.4.3/bin/python3.4m-config
    /opt/python/x64/python-3.4.3/bin/python3.4-config
    /opt/python/x64/python-3.4.3/bin/python3-config
Warning: An outdated version of Git was detected in your PATH.
Git 1.7.10 or newer is required to perform checkouts over HTTPS from GitHub.
Please upgrade: brew install git
Please note that these warnings are just used to help the Homebrew maintainers
with debugging if you file an issue. If everything you use Homebrew for is
working fine: please don't worry and just ignore them. Thanks!

HOMEBREW_VERSION: 0.9.5
ORIGIN: (none)
HEAD: (none)
Last commit: never
HOMEBREW_PREFIX: /exports/people/andersenlab/dec211/.linuxbrew
HOMEBREW_REPOSITORY: /exports/people/andersenlab/dec211/.linuxbrew
HOMEBREW_CELLAR: /exports/people/andersenlab/dec211/.linuxbrew/Cellar
HOMEBREW_BOTTLE_DOMAIN: https://linuxbrew.bintray.com
CPU: 8-core 64-bit 6
OS X: 0-x86_64
Xcode: N/A
CLT: N/A
Clang: 1.1 build 0
X11: N/A
System Ruby: 1.8.7-p302 => /usr/bin/ruby1.8
Perl: /usr/bin/perl
Python: /exports/people/andersenlab/dec211/Python-2.7.9/python
Ruby: /usr/bin/ruby => /usr/bin/ruby1.8
Java: 1.6.0_35

This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by python configure 3.5, which was
generated by GNU Autoconf 2.69.  Invocation command line was

  $ ./configure --prefix=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0 --enable-ipv6 --datarootdir=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share --datadir=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share --enable-shared --without-ensurepip MACOSX_DEPLOYMENT_TARGET=0

## --------- ##
## Platform. ##
## --------- ##

hostname = dhunni
uname -m = x86_64
uname -r = 2.6.32-358.11.1.el6.lustre2.1.6
uname -s = Linux
uname -v = #6 SMP Thu Aug 28 21:47:41 CDT 2014

/usr/bin/uname -p = unknown
/bin/uname -X     = unknown

/bin/arch              = unknown
/usr/bin/arch -k       = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo      = unknown
/bin/machine           = unknown
/usr/bin/oslevel       = unknown
/bin/universe          = unknown

PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin
PATH: /exports/people/andersenlab/dec211/python2/bin
PATH: /exports/people/andersenlab/dec211/bin/FastQC
PATH: /exports/people/andersenlab/dec211/bin
PATH: /exports/people/andersenlab/dec211/Python-2.7.9
PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin
PATH: /exports/people/andersenlab/dec211/python2/bin
PATH: /exports/people/andersenlab/dec211/bin/FastQC
PATH: /exports/people/andersenlab/dec211/bin
PATH: /exports/people/andersenlab/dec211/Python-2.7.9
PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin
PATH: /exports/people/andersenlab/dec211/python2/bin
PATH: /exports/people/andersenlab/dec211/bin/FastQC
PATH: /exports/people/andersenlab/dec211/bin
PATH: /exports/people/andersenlab/dec211/Python-2.7.9
PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin
PATH: /exports/people/andersenlab/dec211/python2/bin
PATH: /exports/people/andersenlab/dec211/bin/FastQC
PATH: /exports/people/andersenlab/dec211/bin
PATH: /exports/people/andersenlab/dec211/Python-2.7.9
PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin
PATH: /exports/people/andersenlab/dec211/python2/bin
PATH: /exports/people/andersenlab/dec211/bin/FastQC
PATH: /exports/people/andersenlab/dec211/bin
PATH: /exports/people/andersenlab/dec211/Python-2.7.9
PATH: /opt/python/x64/python-3.4.3/bin
PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin
PATH: /usr/local/bin
PATH: /usr/bin
PATH: /bin
PATH: /usr/games
PATH: /exports/people/andersenlab/dec211/python_modules/bamsurgeon
PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin
PATH: /exports/people/andersenlab/dec211/python_modules/bamsurgeon
PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin
PATH: /exports/people/andersenlab/dec211/python_modules/bamsurgeon
PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin
PATH: /exports/people/andersenlab/dec211/python_modules/bamsurgeon
PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin
PATH: /exports/people/andersenlab/dec211/python_modules/bamsurgeon
PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin
PATH: /exports/people/andersenlab/dec211/.linuxbrew/Library/ENV/scm


## ----------- ##
## Core tests. ##
## ----------- ##

configure:2899: checking build system type
configure:2913: result: x86_64-unknown-linux-gnu
configure:2933: checking host system type
configure:2946: result: x86_64-unknown-linux-gnu
configure:3058: checking for --enable-universalsdk
configure:3105: result: no
configure:3128: checking for --with-universal-archs
configure:3143: result: no
configure:3293: checking MACHDEP
configure:3499: result: linux
configure:3520: checking for --without-gcc
configure:3543: result: no
configure:3667: checking for gcc
configure:3694: result: /usr/bin/gcc-4.4
configure:3923: checking for C compiler version
configure:3932: /usr/bin/gcc-4.4 --version >&5
gcc-4.4 (Debian 4.4.5-8) 4.4.5
Copyright (C) 2010 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3943: $? = 0
configure:3932: /usr/bin/gcc-4.4 -v >&5
Using built-in specs.
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Debian 4.4.5-8' --with-bugurl=file:///usr/share/doc/gcc-4.4/README.Bugs --enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-4.4 --enable-shared --enable-multiarch --enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.4 --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-objc-gc --with-arch-32=i586 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 4.4.5 (Debian 4.4.5-8) 
configure:3943: $? = 0
configure:3932: /usr/bin/gcc-4.4 -V >&5
gcc-4.4: '-V' option must have argument
configure:3943: $? = 1
configure:3932: /usr/bin/gcc-4.4 -qversion >&5
gcc-4.4: unrecognized option '-qversion'
gcc-4.4: no input files
configure:3943: $? = 1
configure:3963: checking whether the C compiler works
configure:3985: /usr/bin/gcc-4.4 -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:3989: $? = 0
configure:4037: result: yes
configure:4040: checking for C compiler default output file name
configure:4042: result: a.out
configure:4048: checking for suffix of executables
configure:4055: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:4059: $? = 0
configure:4081: result: 
configure:4103: checking whether we are cross compiling
configure:4111: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:4115: $? = 0
configure:4122: ./conftest
configure:4126: $? = 0
configure:4141: result: no
configure:4146: checking for suffix of object files
configure:4168: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:4172: $? = 0
configure:4193: result: o
configure:4197: checking whether we are using the GNU C compiler
configure:4216: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:4216: $? = 0
configure:4225: result: yes
configure:4234: checking whether /usr/bin/gcc-4.4 accepts -g
configure:4254: /usr/bin/gcc-4.4 -c -g -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:4254: $? = 0
configure:4295: result: yes
configure:4312: checking for /usr/bin/gcc-4.4 option to accept ISO C89
configure:4375: /usr/bin/gcc-4.4  -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:4375: $? = 0
configure:4388: result: none needed
configure:4413: checking how to run the C preprocessor
configure:4444: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:4444: $? = 0
configure:4458: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:11:28: error: ac_nonexistent.h: No such file or directory
configure:4458: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:4483: result: /usr/bin/gcc-4.4 -E
configure:4503: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:4503: $? = 0
configure:4517: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:11:28: error: ac_nonexistent.h: No such file or directory
configure:4517: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:4545: checking for grep that handles long lines and -e
configure:4603: result: /bin/grep
configure:4611: checking for --with-cxx-main=<compiler>
configure:4637: result: no
configure:5069: checking for the platform triplet based on compiler characteristics
configure:5187: result: x86_64-linux-gnu
configure:5205: checking for -Wl,--no-as-needed
configure:5221: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,--no-as-needed conftest.c  >&5
configure:5221: $? = 0
configure:5223: result: yes
configure:5238: checking for egrep
configure:5300: result: /bin/grep -E
configure:5305: checking for ANSI C header files
configure:5325: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5325: $? = 0
configure:5398: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:5398: $? = 0
configure:5398: ./conftest
configure:5398: $? = 0
configure:5409: result: yes
configure:5422: checking for sys/types.h
configure:5422: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5422: $? = 0
configure:5422: result: yes
configure:5422: checking for sys/stat.h
configure:5422: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5422: $? = 0
configure:5422: result: yes
configure:5422: checking for stdlib.h
configure:5422: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5422: $? = 0
configure:5422: result: yes
configure:5422: checking for string.h
configure:5422: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5422: $? = 0
configure:5422: result: yes
configure:5422: checking for memory.h
configure:5422: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5422: $? = 0
configure:5422: result: yes
configure:5422: checking for strings.h
configure:5422: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5422: $? = 0
configure:5422: result: yes
configure:5422: checking for inttypes.h
configure:5422: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5422: $? = 0
configure:5422: result: yes
configure:5422: checking for stdint.h
configure:5422: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5422: $? = 0
configure:5422: result: yes
configure:5422: checking for unistd.h
configure:5422: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5422: $? = 0
configure:5422: result: yes
configure:5435: checking minix/config.h usability
configure:5435: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:54:26: error: minix/config.h: No such file or directory
configure:5435: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <minix/config.h>
configure:5435: result: no
configure:5435: checking minix/config.h presence
configure:5435: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:21:26: error: minix/config.h: No such file or directory
configure:5435: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h.  */
| #include <minix/config.h>
configure:5435: result: no
configure:5435: checking for minix/config.h
configure:5435: result: no
configure:5456: checking whether it is safe to define __EXTENSIONS__
configure:5474: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5474: $? = 0
configure:5481: result: yes
configure:5505: checking for --with-suffix
configure:5518: result: 
configure:5524: checking for case-insensitive build directory
configure:5536: result: no
configure:5557: checking LIBRARY
configure:5563: result: libpython$(VERSION)$(ABIFLAGS).a
configure:5605: checking LINKCC
configure:5624: result: $(PURIFY) $(MAINCC)
configure:5633: checking for GNU ld
configure:5645: result: yes
configure:5648: checking for inline
configure:5664: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:5664: $? = 0
configure:5672: result: inline
configure:5698: checking for --enable-shared
configure:5715: result: yes
configure:5718: checking for --enable-profiling
configure:5743: result: no
configure:5751: checking LDLIBRARY
configure:5837: result: libpython$(LDVERSION).so
configure:5883: checking for ranlib
configure:5899: found /usr/bin/ranlib
configure:5910: result: ranlib
configure:5982: checking for ar
configure:5998: found /usr/bin/ar
configure:6009: result: ar
configure:6090: checking for readelf
configure:6106: found /usr/bin/readelf
configure:6117: result: readelf
configure:6155: checking for python3.5
configure:6185: result: no
configure:6155: checking for python3
configure:6171: found /opt/python/x64/python-3.4.3/bin/python3
configure:6182: result: python3
configure:6205: checking for python3.5
configure:6232: result: python3
configure:6274: checking for a BSD-compatible install
configure:6342: result: /usr/bin/install -c
configure:6353: checking for a thread-safe mkdir -p
configure:6392: result: /bin/mkdir -p
configure:6410: checking for --with-pydebug
configure:6429: result: no
configure:6512: checking whether /usr/bin/gcc-4.4 accepts and needs -fno-strict-aliasing
configure:6533: /usr/bin/gcc-4.4 -fno-strict-aliasing -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:6533: $? = 0
configure:6550: /usr/bin/gcc-4.4 -fstrict-aliasing -c -Os -w -pipe -march=core2 -Werror -Wstrict-aliasing -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:6550: $? = 0
configure:6571: result: no
configure:6578: checking if we can turn off /usr/bin/gcc-4.4 unused result warning
configure:6599: /usr/bin/gcc-4.4 -Wunused-result -Werror -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:6599: $? = 0
configure:6613: result: yes
configure:6621: checking for -Werror=declaration-after-statement
configure:6642: /usr/bin/gcc-4.4 -Werror=declaration-after-statement -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:6642: $? = 0
configure:6656: result: yes
configure:6664: checking if we can turn on /usr/bin/gcc-4.4 mixed sign comparison warning
configure:6685: /usr/bin/gcc-4.4 -Wsign-compare -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:6685: $? = 0
configure:6699: result: yes
configure:6707: checking if we can turn on /usr/bin/gcc-4.4 unreachable code warning
configure:6728: /usr/bin/gcc-4.4 -Wunreachable-code -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:6728: $? = 0
configure:6742: result: yes
configure:6920: checking whether pthreads are available without options
configure:6945: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
/tmp/ccLnsGX2.o: In function `main':
conftest.c:(.text+0x16): undefined reference to `pthread_create'
conftest.c:(.text+0x2b): undefined reference to `pthread_detach'
collect2: ld returned 1 exit status
configure:6945: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| /* end confdefs.h.  */
| 
| #include <stdio.h>
| #include <pthread.h>
| 
| void* routine(void* p){return NULL;}
| 
| int main(){
|   pthread_t p;
|   if(pthread_create(&p,NULL,routine,NULL)!=0)
|     return 1;
|   (void)pthread_detach(p);
|   return 0;
| }
| 
configure:6961: result: no
configure:6974: checking whether /usr/bin/gcc-4.4 accepts -Kpthread
configure:7001: /usr/bin/gcc-4.4 -Kpthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
gcc-4.4: unrecognized option '-Kpthread'
/tmp/ccFcLoK9.o: In function `main':
conftest.c:(.text+0x16): undefined reference to `pthread_create'
conftest.c:(.text+0x2b): undefined reference to `pthread_detach'
collect2: ld returned 1 exit status
configure:7001: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| /* end confdefs.h.  */
| 
| #include <stdio.h>
| #include <pthread.h>
| 
| void* routine(void* p){return NULL;}
| 
| int main(){
|   pthread_t p;
|   if(pthread_create(&p,NULL,routine,NULL)!=0)
|     return 1;
|   (void)pthread_detach(p);
|   return 0;
| }
| 
configure:7013: result: no
configure:7024: checking whether /usr/bin/gcc-4.4 accepts -Kthread
configure:7051: /usr/bin/gcc-4.4 -Kthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
gcc-4.4: unrecognized option '-Kthread'
/tmp/ccbf3J0a.o: In function `main':
conftest.c:(.text+0x16): undefined reference to `pthread_create'
conftest.c:(.text+0x2b): undefined reference to `pthread_detach'
collect2: ld returned 1 exit status
configure:7051: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| /* end confdefs.h.  */
| 
| #include <stdio.h>
| #include <pthread.h>
| 
| void* routine(void* p){return NULL;}
| 
| int main(){
|   pthread_t p;
|   if(pthread_create(&p,NULL,routine,NULL)!=0)
|     return 1;
|   (void)pthread_detach(p);
|   return 0;
| }
| 
configure:7063: result: no
configure:7074: checking whether /usr/bin/gcc-4.4 accepts -pthread
configure:7101: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:7101: $? = 0
configure:7101: ./conftest
configure:7101: $? = 0
configure:7113: result: yes
configure:7122: checking whether /usr/bin/g++-4.4 also accepts flags for thread support
configure:7153: result: yes
configure:7160: checking for ANSI C header files
configure:7264: result: yes
configure:7288: checking asm/types.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking asm/types.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for asm/types.h
configure:7288: result: yes
configure:7288: checking conio.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:63:19: error: conio.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <conio.h>
configure:7288: result: no
configure:7288: checking conio.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:30:19: error: conio.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| /* end confdefs.h.  */
| #include <conio.h>
configure:7288: result: no
configure:7288: checking for conio.h
configure:7288: result: no
configure:7288: checking direct.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:63:20: error: direct.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <direct.h>
configure:7288: result: no
configure:7288: checking direct.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:30:20: error: direct.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| /* end confdefs.h.  */
| #include <direct.h>
configure:7288: result: no
configure:7288: checking for direct.h
configure:7288: result: no
configure:7288: checking dlfcn.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking dlfcn.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for dlfcn.h
configure:7288: result: yes
configure:7288: checking errno.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking errno.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for errno.h
configure:7288: result: yes
configure:7288: checking fcntl.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking fcntl.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for fcntl.h
configure:7288: result: yes
configure:7288: checking grp.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking grp.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for grp.h
configure:7288: result: yes
configure:7288: checking ieeefp.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:67:20: error: ieeefp.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <ieeefp.h>
configure:7288: result: no
configure:7288: checking ieeefp.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:34:20: error: ieeefp.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| /* end confdefs.h.  */
| #include <ieeefp.h>
configure:7288: result: no
configure:7288: checking for ieeefp.h
configure:7288: result: no
configure:7288: checking io.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:67:16: error: io.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <io.h>
configure:7288: result: no
configure:7288: checking io.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:34:16: error: io.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| /* end confdefs.h.  */
| #include <io.h>
configure:7288: result: no
configure:7288: checking for io.h
configure:7288: result: no
configure:7288: checking langinfo.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking langinfo.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for langinfo.h
configure:7288: result: yes
configure:7288: checking libintl.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking libintl.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for libintl.h
configure:7288: result: yes
configure:7288: checking process.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:69:21: error: process.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <process.h>
configure:7288: result: no
configure:7288: checking process.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:36:21: error: process.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| /* end confdefs.h.  */
| #include <process.h>
configure:7288: result: no
configure:7288: checking for process.h
configure:7288: result: no
configure:7288: checking pthread.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking pthread.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for pthread.h
configure:7288: result: yes
configure:7288: checking sched.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sched.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sched.h
configure:7288: result: yes
configure:7288: checking shadow.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking shadow.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for shadow.h
configure:7288: result: yes
configure:7288: checking signal.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking signal.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for signal.h
configure:7288: result: yes
configure:7288: checking for stdint.h
configure:7288: result: yes
configure:7288: checking stropts.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking stropts.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for stropts.h
configure:7288: result: yes
configure:7288: checking termios.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking termios.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for termios.h
configure:7288: result: yes
configure:7288: checking for unistd.h
configure:7288: result: yes
configure:7288: checking utime.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking utime.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for utime.h
configure:7288: result: yes
configure:7288: checking poll.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking poll.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for poll.h
configure:7288: result: yes
configure:7288: checking sys/devpoll.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:79:25: error: sys/devpoll.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/devpoll.h>
configure:7288: result: no
configure:7288: checking sys/devpoll.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:46:25: error: sys/devpoll.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| /* end confdefs.h.  */
| #include <sys/devpoll.h>
configure:7288: result: no
configure:7288: checking for sys/devpoll.h
configure:7288: result: no
configure:7288: checking sys/epoll.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/epoll.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/epoll.h
configure:7288: result: yes
configure:7288: checking sys/poll.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/poll.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/poll.h
configure:7288: result: yes
configure:7288: checking sys/audioio.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:81:25: error: sys/audioio.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/audioio.h>
configure:7288: result: no
configure:7288: checking sys/audioio.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:48:25: error: sys/audioio.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| /* end confdefs.h.  */
| #include <sys/audioio.h>
configure:7288: result: no
configure:7288: checking for sys/audioio.h
configure:7288: result: no
configure:7288: checking sys/xattr.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/xattr.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/xattr.h
configure:7288: result: yes
configure:7288: checking sys/bsdtty.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:82:24: error: sys/bsdtty.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/bsdtty.h>
configure:7288: result: no
configure:7288: checking sys/bsdtty.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:49:24: error: sys/bsdtty.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| /* end confdefs.h.  */
| #include <sys/bsdtty.h>
configure:7288: result: no
configure:7288: checking for sys/bsdtty.h
configure:7288: result: no
configure:7288: checking sys/event.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:82:23: error: sys/event.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/event.h>
configure:7288: result: no
configure:7288: checking sys/event.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:49:23: error: sys/event.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| /* end confdefs.h.  */
| #include <sys/event.h>
configure:7288: result: no
configure:7288: checking for sys/event.h
configure:7288: result: no
configure:7288: checking sys/file.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/file.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/file.h
configure:7288: result: yes
configure:7288: checking sys/ioctl.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/ioctl.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/ioctl.h
configure:7288: result: yes
configure:7288: checking sys/kern_control.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:84:30: error: sys/kern_control.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/kern_control.h>
configure:7288: result: no
configure:7288: checking sys/kern_control.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:51:30: error: sys/kern_control.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| /* end confdefs.h.  */
| #include <sys/kern_control.h>
configure:7288: result: no
configure:7288: checking for sys/kern_control.h
configure:7288: result: no
configure:7288: checking sys/loadavg.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:84:25: error: sys/loadavg.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/loadavg.h>
configure:7288: result: no
configure:7288: checking sys/loadavg.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:51:25: error: sys/loadavg.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| /* end confdefs.h.  */
| #include <sys/loadavg.h>
configure:7288: result: no
configure:7288: checking for sys/loadavg.h
configure:7288: result: no
configure:7288: checking sys/lock.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:84:22: error: sys/lock.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/lock.h>
configure:7288: result: no
configure:7288: checking sys/lock.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:51:22: error: sys/lock.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| /* end confdefs.h.  */
| #include <sys/lock.h>
configure:7288: result: no
configure:7288: checking for sys/lock.h
configure:7288: result: no
configure:7288: checking sys/mkdev.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:84:23: error: sys/mkdev.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/mkdev.h>
configure:7288: result: no
configure:7288: checking sys/mkdev.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:51:23: error: sys/mkdev.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| /* end confdefs.h.  */
| #include <sys/mkdev.h>
configure:7288: result: no
configure:7288: checking for sys/mkdev.h
configure:7288: result: no
configure:7288: checking sys/modem.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:84:23: error: sys/modem.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/modem.h>
configure:7288: result: no
configure:7288: checking sys/modem.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:51:23: error: sys/modem.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| /* end confdefs.h.  */
| #include <sys/modem.h>
configure:7288: result: no
configure:7288: checking for sys/modem.h
configure:7288: result: no
configure:7288: checking sys/param.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/param.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/param.h
configure:7288: result: yes
configure:7288: checking sys/select.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/select.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/select.h
configure:7288: result: yes
configure:7288: checking sys/sendfile.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/sendfile.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/sendfile.h
configure:7288: result: yes
configure:7288: checking sys/socket.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/socket.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/socket.h
configure:7288: result: yes
configure:7288: checking sys/statvfs.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/statvfs.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/statvfs.h
configure:7288: result: yes
configure:7288: checking for sys/stat.h
configure:7288: result: yes
configure:7288: checking sys/syscall.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/syscall.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/syscall.h
configure:7288: result: yes
configure:7288: checking sys/sys_domain.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:91:28: error: sys/sys_domain.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/sys_domain.h>
configure:7288: result: no
configure:7288: checking sys/sys_domain.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:58:28: error: sys/sys_domain.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| /* end confdefs.h.  */
| #include <sys/sys_domain.h>
configure:7288: result: no
configure:7288: checking for sys/sys_domain.h
configure:7288: result: no
configure:7288: checking sys/termio.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:91:24: error: sys/termio.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/termio.h>
configure:7288: result: no
configure:7288: checking sys/termio.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:58:24: error: sys/termio.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| /* end confdefs.h.  */
| #include <sys/termio.h>
configure:7288: result: no
configure:7288: checking for sys/termio.h
configure:7288: result: no
configure:7288: checking sys/time.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/time.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/time.h
configure:7288: result: yes
configure:7288: checking sys/times.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/times.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/times.h
configure:7288: result: yes
configure:7288: checking for sys/types.h
configure:7288: result: yes
configure:7288: checking sys/uio.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/uio.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/uio.h
configure:7288: result: yes
configure:7288: checking sys/un.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/un.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/un.h
configure:7288: result: yes
configure:7288: checking sys/utsname.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/utsname.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/utsname.h
configure:7288: result: yes
configure:7288: checking sys/wait.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/wait.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/wait.h
configure:7288: result: yes
configure:7288: checking pty.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking pty.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for pty.h
configure:7288: result: yes
configure:7288: checking libutil.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:99:21: error: libutil.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <libutil.h>
configure:7288: result: no
configure:7288: checking libutil.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:66:21: error: libutil.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| /* end confdefs.h.  */
| #include <libutil.h>
configure:7288: result: no
configure:7288: checking for libutil.h
configure:7288: result: no
configure:7288: checking sys/resource.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sys/resource.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sys/resource.h
configure:7288: result: yes
configure:7288: checking netpacket/packet.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking netpacket/packet.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for netpacket/packet.h
configure:7288: result: yes
configure:7288: checking sysexits.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking sysexits.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for sysexits.h
configure:7288: result: yes
configure:7288: checking bluetooth.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:102:23: error: bluetooth.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <bluetooth.h>
configure:7288: result: no
configure:7288: checking bluetooth.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:69:23: error: bluetooth.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| /* end confdefs.h.  */
| #include <bluetooth.h>
configure:7288: result: no
configure:7288: checking for bluetooth.h
configure:7288: result: no
configure:7288: checking bluetooth/bluetooth.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:102:33: error: bluetooth/bluetooth.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <bluetooth/bluetooth.h>
configure:7288: result: no
configure:7288: checking bluetooth/bluetooth.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:69:33: error: bluetooth/bluetooth.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| /* end confdefs.h.  */
| #include <bluetooth/bluetooth.h>
configure:7288: result: no
configure:7288: checking for bluetooth/bluetooth.h
configure:7288: result: no
configure:7288: checking linux/tipc.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking linux/tipc.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for linux/tipc.h
configure:7288: result: yes
configure:7288: checking spawn.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking spawn.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for spawn.h
configure:7288: result: yes
configure:7288: checking util.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:104:18: error: util.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <util.h>
configure:7288: result: no
configure:7288: checking util.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:71:18: error: util.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| /* end confdefs.h.  */
| #include <util.h>
configure:7288: result: no
configure:7288: checking for util.h
configure:7288: result: no
configure:7288: checking alloca.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking alloca.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for alloca.h
configure:7288: result: yes
configure:7288: checking endian.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking endian.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:7288: $? = 0
configure:7288: result: yes
configure:7288: checking for endian.h
configure:7288: result: yes
configure:7288: checking sys/endian.h usability
configure:7288: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:106:24: error: sys/endian.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sys/endian.h>
configure:7288: result: no
configure:7288: checking sys/endian.h presence
configure:7288: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
conftest.c:73:24: error: sys/endian.h: No such file or directory
configure:7288: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| /* end confdefs.h.  */
| #include <sys/endian.h>
configure:7288: result: no
configure:7288: checking for sys/endian.h
configure:7288: result: no
configure:7301: checking for dirent.h that defines DIR
configure:7320: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7320: $? = 0
configure:7328: result: yes
configure:7341: checking for library containing opendir
configure:7372: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:7372: $? = 0
configure:7389: result: none required
configure:7456: checking whether sys/types.h defines makedev
configure:7472: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:7472: $? = 0
configure:7481: result: yes
configure:7510: checking for net/if.h
configure:7510: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7510: $? = 0
configure:7510: result: yes
configure:7537: checking for linux/netlink.h
configure:7537: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7537: $? = 0
configure:7537: result: yes
configure:7560: checking for linux/can.h
configure:7560: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7560: $? = 0
configure:7560: result: yes
configure:7560: checking for linux/can/raw.h
configure:7560: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7560: $? = 0
configure:7560: result: yes
configure:7560: checking for linux/can/bcm.h
configure:7560: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
In file included from conftest.c:84:
/usr/include/linux/can/bcm.h:35: error: expected specifier-qualifier-list before 'canid_t'
configure:7560: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| /* end confdefs.h.  */
| 
| #ifdef HAVE_SYS_SOCKET_H
| #include <sys/socket.h>
| #endif
| 
| 
| #include <linux/can/bcm.h>
configure:7560: result: no
configure:7578: checking for clock_t in time.h
configure:7597: result: yes
configure:7600: checking for makedev
configure:7623: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:7623: $? = 0
configure:7630: result: yes
configure:7639: checking for le64toh
configure:7660: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:7660: $? = 0
configure:7667: result: yes
configure:7683: checking Solaris LFS bug
configure:7700: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7700: $? = 0
configure:7706: result: no
configure:7738: checking for mode_t
configure:7738: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7738: $? = 0
configure:7738: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:121: error: expected expression before ')' token
configure:7738: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((mode_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:7738: result: yes
configure:7749: checking for off_t
configure:7749: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7749: $? = 0
configure:7749: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:121: error: expected expression before ')' token
configure:7749: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((off_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:7749: result: yes
configure:7760: checking for pid_t
configure:7760: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7760: $? = 0
configure:7760: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:121: error: expected expression before ')' token
configure:7760: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((pid_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:7760: result: yes
configure:7776: checking for size_t
configure:7776: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7776: $? = 0
configure:7776: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:122: error: expected expression before ')' token
configure:7776: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((size_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:7776: result: yes
configure:7787: checking for uid_t in sys/types.h
configure:7806: result: yes
configure:7825: checking for uint32_t
configure:7825: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7825: $? = 0
configure:7825: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:122: error: expected expression before ')' token
configure:7825: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((uint32_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:7825: result: yes
configure:7832: checking for uint32_t
configure:7832: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7832: $? = 0
configure:7832: result: yes
configure:7847: checking for uint64_t
configure:7847: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7847: $? = 0
configure:7847: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:123: error: expected expression before ')' token
configure:7847: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((uint64_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:7847: result: yes
configure:7854: checking for uint64_t
configure:7854: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7854: $? = 0
configure:7854: result: yes
configure:7869: checking for int32_t
configure:7869: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7869: $? = 0
configure:7869: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:124: error: expected expression before ')' token
configure:7869: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((int32_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:7869: result: yes
configure:7876: checking for int32_t
configure:7876: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7876: $? = 0
configure:7876: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:127: error: size of array 'test_array' is negative
configure:7876: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| 	        enum { N = 32 / 2 - 1 };
| int
| main ()
| {
| static int test_array [1 - 2 * !((int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 1)
| 		 < (int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 2))];
| test_array [0] = 0;
| return test_array [0];
| 
|   ;
|   return 0;
| }
configure:7876: result: yes
configure:7888: checking for int64_t
configure:7888: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7888: $? = 0
configure:7888: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:125: error: expected expression before ')' token
configure:7888: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((int64_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:7888: result: yes
configure:7895: checking for int64_t
configure:7895: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7895: $? = 0
configure:7895: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:128: error: size of array 'test_array' is negative
configure:7895: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| 	        enum { N = 64 / 2 - 1 };
| int
| main ()
| {
| static int test_array [1 - 2 * !((int64_t) (((((int64_t) 1 << N) << N) - 1) * 2 + 1)
| 		 < (int64_t) (((((int64_t) 1 << N) << N) - 1) * 2 + 2))];
| test_array [0] = 0;
| return test_array [0];
| 
|   ;
|   return 0;
| }
configure:7895: result: yes
configure:7907: checking for ssize_t
configure:7907: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7907: $? = 0
configure:7907: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:126: error: expected expression before ')' token
configure:7907: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((ssize_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:7907: result: yes
configure:7914: checking for __uint128_t
configure:7914: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:7914: $? = 0
configure:7914: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:127: error: expected expression before ')' token
configure:7914: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((__uint128_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:7914: result: yes
configure:7928: checking size of int
configure:7933: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:7933: $? = 0
configure:7933: ./conftest
configure:7933: $? = 0
configure:7947: result: 4
configure:7961: checking size of long
configure:7966: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:7966: $? = 0
configure:7966: ./conftest
configure:7966: $? = 0
configure:7980: result: 8
configure:7994: checking size of void *
configure:7999: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:7999: $? = 0
configure:7999: ./conftest
configure:7999: $? = 0
configure:8013: result: 8
configure:8027: checking size of short
configure:8032: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8032: $? = 0
configure:8032: ./conftest
configure:8032: $? = 0
configure:8046: result: 2
configure:8060: checking size of float
configure:8065: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8065: $? = 0
configure:8065: ./conftest
configure:8065: $? = 0
configure:8079: result: 4
configure:8093: checking size of double
configure:8098: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8098: $? = 0
configure:8098: ./conftest
configure:8098: $? = 0
configure:8112: result: 8
configure:8126: checking size of fpos_t
configure:8131: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8131: $? = 0
configure:8131: ./conftest
configure:8131: $? = 0
configure:8145: result: 16
configure:8159: checking size of size_t
configure:8164: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8164: $? = 0
configure:8164: ./conftest
configure:8164: $? = 0
configure:8178: result: 8
configure:8192: checking size of pid_t
configure:8197: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8197: $? = 0
configure:8197: ./conftest
configure:8197: $? = 0
configure:8211: result: 4
configure:8222: checking for long long support
configure:8236: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:8236: $? = 0
configure:8245: result: yes
configure:8252: checking size of long long
configure:8257: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8257: $? = 0
configure:8257: ./conftest
configure:8257: $? = 0
configure:8271: result: 8
configure:8283: checking for long double support
configure:8297: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:8297: $? = 0
configure:8306: result: yes
configure:8313: checking size of long double
configure:8318: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8318: $? = 0
configure:8318: ./conftest
configure:8318: $? = 0
configure:8332: result: 16
configure:8345: checking for _Bool support
configure:8359: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:8359: $? = 0
configure:8368: result: yes
configure:8375: checking size of _Bool
configure:8380: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8380: $? = 0
configure:8380: ./conftest
configure:8380: $? = 0
configure:8394: result: 1
configure:8406: checking for uintptr_t
configure:8406: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:8406: $? = 0
configure:8406: /usr/bin/gcc-4.4 -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:117: error: expected expression before ')' token
configure:8406: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| /* end confdefs.h.  */
| #ifdef HAVE_STDINT_H
|         #include <stdint.h>
|         #endif
|         #ifdef HAVE_INTTYPES_H
|         #include <inttypes.h>
|         #endif
| 
| int
| main ()
| {
| if (sizeof ((uintptr_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:8406: result: yes
configure:8423: checking size of uintptr_t
configure:8428: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8428: $? = 0
configure:8428: ./conftest
configure:8428: $? = 0
configure:8442: result: 8
configure:8459: checking size of off_t
configure:8464: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8464: $? = 0
configure:8464: ./conftest
configure:8464: $? = 0
configure:8483: result: 8
configure:8494: checking whether to enable large file support
configure:8506: result: no
configure:8518: checking size of time_t
configure:8523: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8523: $? = 0
configure:8523: ./conftest
configure:8523: $? = 0
configure:8545: result: 8
configure:8566: checking for pthread_t
configure:8582: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:8582: $? = 0
configure:8586: result: yes
configure:8593: checking size of pthread_t
configure:8598: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c  >&5
configure:8598: $? = 0
configure:8598: ./conftest
configure:8598: $? = 0
configure:8617: result: 8
configure:8718: checking for --enable-framework
configure:8735: result: no
configure:8739: checking for dyld
configure:8750: result: no
configure:8765: checking the extension of shared libraries
configure:8779: result: .so
configure:8786: checking LDSHARED
configure:8921: result: $(CC) -shared
configure:8927: checking CCSHARED
configure:8961: result: -fPIC
configure:8965: checking LINKFORSHARED
configure:9019: result: -Xlinker -export-dynamic
configure:9024: checking CFLAGSFORSHARED
configure:9037: result: $(CCSHARED)
configure:9049: checking SHLIBS
configure:9055: result: $(LIBS)
configure:9060: checking for sendfile in -lsendfile
configure:9085: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lsendfile   >&5
/usr/bin/ld: cannot find -lsendfile
collect2: ld returned 1 exit status
configure:9085: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char sendfile ();
| int
| main ()
| {
| return sendfile ();
|   ;
|   return 0;
| }
configure:9094: result: no
configure:9105: checking for dlopen in -ldl
configure:9130: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -ldl   >&5
configure:9130: $? = 0
configure:9139: result: yes
configure:9150: checking for shl_load in -ldld
configure:9175: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -ldld  -ldl  >&5
/usr/bin/ld: cannot find -ldld
collect2: ld returned 1 exit status
configure:9175: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char shl_load ();
| int
| main ()
| {
| return shl_load ();
|   ;
|   return 0;
| }
configure:9184: result: no
configure:9195: checking for RAND_egd in -lcrypto
configure:9220: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lcrypto  -ldl  >&5
configure:9220: $? = 0
configure:9229: result: yes
configure:9240: checking for library containing sem_init
configure:9271: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -ldl  >&5
/tmp/cc7AuVsj.o: In function `main':
conftest.c:(.text+0x7): undefined reference to `sem_init'
collect2: ld returned 1 exit status
configure:9271: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char sem_init ();
| int
| main ()
| {
| return sem_init ();
|   ;
|   return 0;
| }
configure:9271: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread  -ldl  >&5
configure:9271: $? = 0
configure:9288: result: -lpthread
configure:9301: checking for textdomain in -lintl
configure:9326: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lintl  -lpthread -ldl  >&5
/usr/bin/ld: cannot find -lintl
collect2: ld returned 1 exit status
configure:9326: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char textdomain ();
| int
| main ()
| {
| return textdomain ();
|   ;
|   return 0;
| }
configure:9335: result: no
configure:9382: checking aligned memory access is required
configure:9404: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:9404: $? = 0
configure:9404: ./conftest
configure:9404: $? = 0
configure:9419: result: no
configure:9426: checking for --with-hash-algorithm
configure:9449: result: default
configure:9454: checking for --with-address-sanitizer
configure:9466: result: no
configure:9472: checking for t_open in -lnsl
configure:9497: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lnsl  -lpthread -ldl  >&5
/tmp/ccwx7Aqj.o: In function `main':
conftest.c:(.text+0x7): undefined reference to `t_open'
collect2: ld returned 1 exit status
configure:9497: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char t_open ();
| int
| main ()
| {
| return t_open ();
|   ;
|   return 0;
| }
configure:9506: result: no
configure:9512: checking for socket in -lsocket
configure:9537: /usr/bin/gcc-4.4 -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lsocket -lpthread -ldl  -lpthread -ldl  >&5
/usr/bin/ld: cannot find -lsocket
collect2: ld returned 1 exit status
configure:9537: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| /* end confdefs.h.  */
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char socket ();
| int
| main ()
| {
| return socket ();
|   ;
|   return 0;
| }
configure:9546: result: no
configure:9553: checking for --with-libs
configure:9564: result: no
configure:9623: checking for pkg-config
configure:9641: found /exports/people/andersenlab/dec211/.linuxbrew/bin/pkg-config
configure:9653: result: /exports/people/andersenlab/dec211/.linuxbrew/bin/pkg-config
configure:9678: checking pkg-config is at least version 0.9.0
configure:9681: result: yes
configure:9691: checking for --with-system-expat
configure:9702: result: no
configure:9706: checking for --with-system-ffi
configure:9724: result: no
configure:9728: checking for --with-system-libmpdec
configure:9739: result: no
configure:9743: checking for --enable-loadable-sqlite-extensions
configure:9753: result: no
configure:9759: checking for --with-tcltk-includes
configure:9769: result: default
configure:9771: checking for --with-tcltk-libs
configure:9781: result: default
configure:9797: checking for --with-dbmliborder
configure:9816: result: 
configure:9822: checking for --with-signal-module
configure:9834: result: yes
configure:9856: checking for --with-threads
configure:9876: result: yes
configure:10307: checking if PTHREAD_SCOPE_SYSTEM is supported
configure:10332: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10332: $? = 0
configure:10332: ./conftest
configure:10332: $? = 0
configure:10344: result: yes
configure:10353: checking for pthread_sigmask
configure:10353: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10353: $? = 0
configure:10353: result: yes
configure:10370: checking for pthread_atfork
configure:10370: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10370: $? = 0
configure:10370: result: yes
configure:10384: checking if --enable-ipv6 is specified
configure:10394: result: yes
configure:10478: checking ipv6 stack type
configure:10611: result: linux-glibc
configure:10631: checking for CAN_RAW_FD_FRAMES
configure:10645: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
In file included from /usr/include/linux/can/raw.h:18,
                 from conftest.c:120:
/usr/include/linux/can.h:81: error: expected specifier-qualifier-list before 'sa_family_t'
conftest.c: In function 'main':
conftest.c:124: error: 'CAN_RAW_FD_FRAMES' undeclared (first use in this function)
conftest.c:124: error: (Each undeclared identifier is reported only once
conftest.c:124: error: for each function it appears in.)
configure:10645: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| /* end confdefs.h.  */
|  /* CAN_RAW_FD_FRAMES available check */
| #include <linux/can/raw.h>
| int
| main ()
| {
| int can_raw_fd_frames = CAN_RAW_FD_FRAMES;
|   ;
|   return 0;
| }
configure:10655: result: no
configure:10661: checking for OSX 10.5 SDK or later
configure:10676: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:120:29: error: Carbon/Carbon.h: No such file or directory
conftest.c: In function 'main':
conftest.c:124: error: 'FSIORefNum' undeclared (first use in this function)
conftest.c:124: error: (Each undeclared identifier is reported only once
conftest.c:124: error: for each function it appears in.)
conftest.c:124: error: expected ';' before 'fRef'
configure:10676: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| /* end confdefs.h.  */
| 
|   #include <Carbon/Carbon.h>
| int
| main ()
| {
| FSIORefNum fRef = 0
|   ;
|   return 0;
| }
| 
configure:10686: result: no
configure:10693: checking for --with-doc-strings
configure:10711: result: yes
configure:10715: checking for --with-tsc
configure:10732: result: no
configure:10738: checking for --with-pymalloc
configure:10758: result: yes
configure:10762: checking for --with-valgrind
configure:10772: result: no
configure:10797: checking for dlopen
configure:10797: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10797: $? = 0
configure:10797: result: yes
configure:10810: checking DYNLOADFILE
configure:10834: result: dynload_shlib.o
configure:10846: checking MACHDEP_OBJS
configure:10855: result: none
configure:10887: checking for alarm
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for accept4
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setitimer
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getitimer
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for bind_textdomain_codeset
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for chown
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for clock
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for confstr
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for ctermid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for dup3
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for execv
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for faccessat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for fchmod
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for fchmodat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for fchown
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for fchownat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for fexecve
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for fdopendir
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for fork
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for fpathconf
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for fstatat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for ftime
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for ftruncate
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for futimesat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for futimens
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for futimes
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for gai_strerror
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getentropy
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/ccW2EOCb.o: In function `main':
conftest.c:(.text+0x7): undefined reference to `getentropy'
collect2: ld returned 1 exit status
configure:10887: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| /* end confdefs.h.  */
| /* Define getentropy to an innocuous variant, in case <limits.h> declares getentropy.
|    For example, HP-UX 11i <limits.h> declares gettimeofday.  */
| #define getentropy innocuous_getentropy
| 
| /* System header to define __stub macros and hopefully few prototypes,
|     which can conflict with char getentropy (); below.
|     Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
|     <limits.h> exists even on freestanding compilers.  */
| 
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 
| #undef getentropy
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char getentropy ();
| /* The GNU C library defines this for functions which it implements
|     to always fail with ENOSYS.  Some functions are actually named
|     something starting with __ and the normal name is an alias.  */
| #if defined __stub_getentropy || defined __stub___getentropy
| choke me
| #endif
| 
| int
| main ()
| {
| return getentropy ();
|   ;
|   return 0;
| }
configure:10887: result: no
configure:10887: checking for getgrouplist
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getgroups
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getlogin
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getloadavg
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getpeername
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getpgid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getpid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getpriority
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getresuid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getresgid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getpwent
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getspnam
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getspent
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getsid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for getwd
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/ccYRFSgY.o: In function `main':
conftest.c:(.text+0x7): warning: the `getwd' function is dangerous and should not be used.
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for if_nameindex
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for initgroups
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for kill
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for killpg
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for lchmod
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
conftest.c:197: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'me'
configure:10887: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| /* end confdefs.h.  */
| /* Define lchmod to an innocuous variant, in case <limits.h> declares lchmod.
|    For example, HP-UX 11i <limits.h> declares gettimeofday.  */
| #define lchmod innocuous_lchmod
| 
| /* System header to define __stub macros and hopefully few prototypes,
|     which can conflict with char lchmod (); below.
|     Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
|     <limits.h> exists even on freestanding compilers.  */
| 
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 
| #undef lchmod
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char lchmod ();
| /* The GNU C library defines this for functions which it implements
|     to always fail with ENOSYS.  Some functions are actually named
|     something starting with __ and the normal name is an alias.  */
| #if defined __stub_lchmod || defined __stub___lchmod
| choke me
| #endif
| 
| int
| main ()
| {
| return lchmod ();
|   ;
|   return 0;
| }
configure:10887: result: no
configure:10887: checking for lchown
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for lockf
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for linkat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for lstat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for lutimes
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for mmap
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for memrchr
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for mbrtowc
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for mkdirat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for mkfifo
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for mkfifoat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for mknod
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for mknodat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for mktime
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for mremap
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for nice
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for openat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for pathconf
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for pause
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for pipe2
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for plock
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/ccilFqUk.o: In function `main':
conftest.c:(.text+0x7): undefined reference to `plock'
collect2: ld returned 1 exit status
configure:10887: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| /* end confdefs.h.  */
| /* Define plock to an innocuous variant, in case <limits.h> declares plock.
|    For example, HP-UX 11i <limits.h> declares gettimeofday.  */
| #define plock innocuous_plock
| 
| /* System header to define __stub macros and hopefully few prototypes,
|     which can conflict with char plock (); below.
|     Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
|     <limits.h> exists even on freestanding compilers.  */
| 
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 
| #undef plock
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char plock ();
| /* The GNU C library defines this for functions which it implements
|     to always fail with ENOSYS.  Some functions are actually named
|     something starting with __ and the normal name is an alias.  */
| #if defined __stub_plock || defined __stub___plock
| choke me
| #endif
| 
| int
| main ()
| {
| return plock ();
|   ;
|   return 0;
| }
configure:10887: result: no
configure:10887: checking for poll
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for posix_fallocate
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for posix_fadvise
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for pread
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for pthread_init
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/ccg1ou2r.o: In function `main':
conftest.c:(.text+0x7): undefined reference to `pthread_init'
collect2: ld returned 1 exit status
configure:10887: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| /* end confdefs.h.  */
| /* Define pthread_init to an innocuous variant, in case <limits.h> declares pthread_init.
|    For example, HP-UX 11i <limits.h> declares gettimeofday.  */
| #define pthread_init innocuous_pthread_init
| 
| /* System header to define __stub macros and hopefully few prototypes,
|     which can conflict with char pthread_init (); below.
|     Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
|     <limits.h> exists even on freestanding compilers.  */
| 
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 
| #undef pthread_init
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char pthread_init ();
| /* The GNU C library defines this for functions which it implements
|     to always fail with ENOSYS.  Some functions are actually named
|     something starting with __ and the normal name is an alias.  */
| #if defined __stub_pthread_init || defined __stub___pthread_init
| choke me
| #endif
| 
| int
| main ()
| {
| return pthread_init ();
|   ;
|   return 0;
| }
configure:10887: result: no
configure:10887: checking for pthread_kill
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for putenv
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for pwrite
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for readlink
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for readlinkat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for readv
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for realpath
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for renameat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for select
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sem_open
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sem_timedwait
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sem_getvalue
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sem_unlink
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sendfile
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setegid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for seteuid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setgid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sethostname
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setlocale
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setregid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setreuid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setresuid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setresgid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setsid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setpgid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setpgrp
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setpriority
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setuid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for setvbuf
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sched_get_priority_max
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sched_setaffinity
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sched_setscheduler
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sched_setparam
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sched_rr_get_interval
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sigaction
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sigaltstack
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for siginterrupt
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sigpending
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sigrelse
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sigtimedwait
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sigwait
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sigwaitinfo
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for snprintf
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for strftime
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for strlcpy
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/ccZTfR4O.o: In function `main':
conftest.c:(.text+0x7): undefined reference to `strlcpy'
collect2: ld returned 1 exit status
configure:10887: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| /* end confdefs.h.  */
| /* Define strlcpy to an innocuous variant, in case <limits.h> declares strlcpy.
|    For example, HP-UX 11i <limits.h> declares gettimeofday.  */
| #define strlcpy innocuous_strlcpy
| 
| /* System header to define __stub macros and hopefully few prototypes,
|     which can conflict with char strlcpy (); below.
|     Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
|     <limits.h> exists even on freestanding compilers.  */
| 
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 
| #undef strlcpy
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char strlcpy ();
| /* The GNU C library defines this for functions which it implements
|     to always fail with ENOSYS.  Some functions are actually named
|     something starting with __ and the normal name is an alias.  */
| #if defined __stub_strlcpy || defined __stub___strlcpy
| choke me
| #endif
| 
| int
| main ()
| {
| return strlcpy ();
|   ;
|   return 0;
| }
configure:10887: result: no
configure:10887: checking for symlinkat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sync
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for sysconf
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for tcgetpgrp
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for tcsetpgrp
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for tempnam
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/ccTaxvGa.o: In function `main':
conftest.c:(.text+0x7): warning: the use of `tempnam' is dangerous, better use `mkstemp'
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for timegm
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for times
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for tmpfile
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for tmpnam
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/ccochYFs.o: In function `main':
conftest.c:(.text+0x7): warning: the use of `tmpnam' is dangerous, better use `mkstemp'
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for tmpnam_r
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/cc3LZHvu.o: In function `main':
conftest.c:(.text+0x7): warning: the use of `tmpnam_r' is dangerous, better use `mkstemp'
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for truncate
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for uname
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for unlinkat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for unsetenv
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for utimensat
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for utimes
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for waitid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for waitpid
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for wait3
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for wait4
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for wcscoll
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for wcsftime
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for wcsxfrm
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for wmemcmp
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for writev
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:10887: $? = 0
configure:10887: result: yes
configure:10887: checking for _getpty
configure:10887: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/ccysyY3h.o: In function `main':
conftest.c:(.text+0x7): undefined reference to `_getpty'
collect2: ld returned 1 exit status
configure:10887: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| /* end confdefs.h.  */
| /* Define _getpty to an innocuous variant, in case <limits.h> declares _getpty.
|    For example, HP-UX 11i <limits.h> declares gettimeofday.  */
| #define _getpty innocuous__getpty
| 
| /* System header to define __stub macros and hopefully few prototypes,
|     which can conflict with char _getpty (); below.
|     Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
|     <limits.h> exists even on freestanding compilers.  */
| 
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 
| #undef _getpty
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char _getpty ();
| /* The GNU C library defines this for functions which it implements
|     to always fail with ENOSYS.  Some functions are actually named
|     something starting with __ and the normal name is an alias.  */
| #if defined __stub__getpty || defined __stub____getpty
| choke me
| #endif
| 
| int
| main ()
| {
| return _getpty ();
|   ;
|   return 0;
| }
configure:10887: result: no
configure:10897: checking whether dirfd is declared
configure:10897: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:10897: $? = 0
configure:10897: result: yes
configure:10909: checking for chroot
configure:10922: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:10922: $? = 0
configure:10926: result: yes
configure:10934: checking for link
configure:10947: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:10947: $? = 0
configure:10951: result: yes
configure:10959: checking for symlink
configure:10972: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:10972: $? = 0
configure:10976: result: yes
configure:10984: checking for fchdir
configure:10997: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:10997: $? = 0
configure:11001: result: yes
configure:11009: checking for fsync
configure:11022: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:11022: $? = 0
configure:11026: result: yes
configure:11034: checking for fdatasync
configure:11047: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:11047: $? = 0
configure:11051: result: yes
configure:11059: checking for epoll
configure:11072: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:11072: $? = 0
configure:11076: result: yes
configure:11084: checking for epoll_create1
configure:11097: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:11097: $? = 0
configure:11101: result: yes
configure:11109: checking for kqueue
configure:11125: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:274:23: error: sys/event.h: No such file or directory
configure:11125: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| /* end confdefs.h.  */
| 
| #include <sys/types.h>
| #include <sys/event.h>
| 
| int
| main ()
| {
| int x=kqueue()
|   ;
|   return 0;
| }
configure:11132: result: no
configure:11137: checking for prlimit
configure:11153: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:279: error: 'prlimit' undeclared (first use in this function)
conftest.c:279: error: (Each undeclared identifier is reported only once
conftest.c:279: error: for each function it appears in.)
configure:11153: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| /* end confdefs.h.  */
| 
| #include <sys/time.h>
| #include <sys/resource.h>
| 
| int
| main ()
| {
| void *x=prlimit
|   ;
|   return 0;
| }
configure:11160: result: no
configure:11172: checking for ctermid_r
configure:11187: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:278: error: 'ctermid_r' undeclared (first use in this function)
conftest.c:278: error: (Each undeclared identifier is reported only once
conftest.c:278: error: for each function it appears in.)
configure:11187: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| /* end confdefs.h.  */
| 
| #include <stdio.h>
| 
| int
| main ()
| {
| void* p = ctermid_r
|   ;
|   return 0;
| }
configure:11194: result: no
configure:11200: checking for flock declaration
configure:11217: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:11217: $? = 0
configure:11226: result: yes
configure:11231: checking for flock
configure:11231: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:11231: $? = 0
configure:11231: result: yes
configure:11289: checking for getpagesize
configure:11304: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:11304: $? = 0
configure:11308: result: yes
configure:11317: checking for broken unsetenv
configure:11332: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:11332: $? = 0
configure:11333: result: no
configure:11349: checking for true
configure:11365: found /bin/true
configure:11376: result: true
configure:11389: checking for inet_aton in -lc
configure:11414: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lc  -lpthread -ldl  >&5
configure:11414: $? = 0
configure:11423: result: yes
configure:11479: checking for chflags
configure:11500: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/cc8rYMkL.o: In function `main':
conftest.c:(.text+0xf): warning: warning: chflags is not implemented and will always fail
configure:11500: $? = 0
configure:11500: ./conftest
configure:11500: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| /* end confdefs.h.  */
| 
| #include <sys/stat.h>
| #include <unistd.h>
| int main(int argc, char*argv[])
| {
|   if(chflags(argv[0], 0) != 0)
|     return 1;
|   return 0;
| }
| 
configure:11511: result: no
configure:11528: checking for lchflags
configure:11549: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/cc9dBVCM.o: In function `main':
conftest.c:(.text+0xf): undefined reference to `lchflags'
collect2: ld returned 1 exit status
configure:11549: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| /* end confdefs.h.  */
| 
| #include <sys/stat.h>
| #include <unistd.h>
| int main(int argc, char*argv[])
| {
|   if(lchflags(argv[0], 0) != 0)
|     return 1;
|   return 0;
| }
| 
configure:11560: result: no
configure:11586: checking for inflateCopy in -lz
configure:11611: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lz  -lpthread -ldl  >&5
configure:11611: $? = 0
configure:11620: result: yes
configure:11636: checking for hstrerror
configure:11651: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:11651: $? = 0
configure:11655: result: yes
configure:11665: checking for inet_aton
configure:11683: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
configure:11683: $? = 0
configure:11687: result: yes
configure:11697: checking for inet_pton
configure:11715: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:11715: $? = 0
configure:11719: result: yes
configure:11729: checking for setgroups
configure:11747: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:11747: $? = 0
configure:11751: result: yes
configure:11764: checking for openpty
configure:11764: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  >&5
/tmp/ccqrd0z3.o: In function `main':
conftest.c:(.text+0x7): undefined reference to `openpty'
collect2: ld returned 1 exit status
configure:11764: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| /* end confdefs.h.  */
| /* Define openpty to an innocuous variant, in case <limits.h> declares openpty.
|    For example, HP-UX 11i <limits.h> declares gettimeofday.  */
| #define openpty innocuous_openpty
| 
| /* System header to define __stub macros and hopefully few prototypes,
|     which can conflict with char openpty (); below.
|     Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
|     <limits.h> exists even on freestanding compilers.  */
| 
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 
| #undef openpty
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char openpty ();
| /* The GNU C library defines this for functions which it implements
|     to always fail with ENOSYS.  Some functions are actually named
|     something starting with __ and the normal name is an alias.  */
| #if defined __stub_openpty || defined __stub___openpty
| choke me
| #endif
| 
| int
| main ()
| {
| return openpty ();
|   ;
|   return 0;
| }
configure:11764: result: no
configure:11771: checking for openpty in -lutil
configure:11796: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lutil  -lpthread -ldl  >&5
configure:11796: $? = 0
configure:11805: result: yes
configure:11861: checking for forkpty
configure:11861: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
configure:11861: $? = 0
configure:11861: result: yes
configure:11960: checking for memmove
configure:11960: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
configure:11960: $? = 0
configure:11960: result: yes
configure:11974: checking for fseek64
configure:11974: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
/tmp/ccr0qkcj.o: In function `main':
conftest.c:(.text+0x7): undefined reference to `fseek64'
collect2: ld returned 1 exit status
configure:11974: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| /* end confdefs.h.  */
| /* Define fseek64 to an innocuous variant, in case <limits.h> declares fseek64.
|    For example, HP-UX 11i <limits.h> declares gettimeofday.  */
| #define fseek64 innocuous_fseek64
| 
| /* System header to define __stub macros and hopefully few prototypes,
|     which can conflict with char fseek64 (); below.
|     Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
|     <limits.h> exists even on freestanding compilers.  */
| 
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 
| #undef fseek64
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char fseek64 ();
| /* The GNU C library defines this for functions which it implements
|     to always fail with ENOSYS.  Some functions are actually named
|     something starting with __ and the normal name is an alias.  */
| #if defined __stub_fseek64 || defined __stub___fseek64
| choke me
| #endif
| 
| int
| main ()
| {
| return fseek64 ();
|   ;
|   return 0;
| }
configure:11974: result: no
configure:11974: checking for fseeko
configure:11974: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
configure:11974: $? = 0
configure:11974: result: yes
configure:11974: checking for fstatvfs
configure:11974: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
configure:11974: $? = 0
configure:11974: result: yes
configure:11974: checking for ftell64
configure:11974: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
/tmp/cc18oUos.o: In function `main':
conftest.c:(.text+0x7): undefined reference to `ftell64'
collect2: ld returned 1 exit status
configure:11974: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| /* end confdefs.h.  */
| /* Define ftell64 to an innocuous variant, in case <limits.h> declares ftell64.
|    For example, HP-UX 11i <limits.h> declares gettimeofday.  */
| #define ftell64 innocuous_ftell64
| 
| /* System header to define __stub macros and hopefully few prototypes,
|     which can conflict with char ftell64 (); below.
|     Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
|     <limits.h> exists even on freestanding compilers.  */
| 
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 
| #undef ftell64
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char ftell64 ();
| /* The GNU C library defines this for functions which it implements
|     to always fail with ENOSYS.  Some functions are actually named
|     something starting with __ and the normal name is an alias.  */
| #if defined __stub_ftell64 || defined __stub___ftell64
| choke me
| #endif
| 
| int
| main ()
| {
| return ftell64 ();
|   ;
|   return 0;
| }
configure:11974: result: no
configure:11974: checking for ftello
configure:11974: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
configure:11974: $? = 0
configure:11974: result: yes
configure:11974: checking for statvfs
configure:11974: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
configure:11974: $? = 0
configure:11974: result: yes
configure:11984: checking for dup2
configure:11984: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
configure:11984: $? = 0
configure:11984: result: yes
configure:11997: checking for strdup
configure:11997: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
configure:11997: $? = 0
configure:11997: result: yes
configure:12013: checking for getpgrp
configure:12013: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
configure:12013: $? = 0
configure:12013: result: yes
configure:12029: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:293: error: too many arguments to function 'getpgrp'
configure:12029: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| /* end confdefs.h.  */
| #include <unistd.h>
| int
| main ()
| {
| getpgrp(0);
|   ;
|   return 0;
| }
configure:12041: checking for setpgrp
configure:12041: result: yes
configure:12057: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:294: error: too many arguments to function 'setpgrp'
configure:12057: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| /* end confdefs.h.  */
| #include <unistd.h>
| int
| main ()
| {
| setpgrp(0,0);
|   ;
|   return 0;
| }
configure:12069: checking for gettimeofday
configure:12069: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
configure:12069: $? = 0
configure:12069: result: yes
configure:12085: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12085: $? = 0
configure:12101: checking for clock_gettime
configure:12101: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil >&5
/tmp/ccYxUfAO.o: In function `main':
conftest.c:(.text+0x7): undefined reference to `clock_gettime'
collect2: ld returned 1 exit status
configure:12101: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| /* end confdefs.h.  */
| /* Define clock_gettime to an innocuous variant, in case <limits.h> declares clock_gettime.
|    For example, HP-UX 11i <limits.h> declares gettimeofday.  */
| #define clock_gettime innocuous_clock_gettime
| 
| /* System header to define __stub macros and hopefully few prototypes,
|     which can conflict with char clock_gettime (); below.
|     Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
|     <limits.h> exists even on freestanding compilers.  */
| 
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| 
| #undef clock_gettime
| 
| /* Override any GCC internal prototype to avoid an error.
|    Use char because int might match the return type of a GCC
|    builtin and then its argument prototype would still apply.  */
| #ifdef __cplusplus
| extern "C"
| #endif
| char clock_gettime ();
| /* The GNU C library defines this for functions which it implements
|     to always fail with ENOSYS.  Some functions are actually named
|     something starting with __ and the normal name is an alias.  */
| #if defined __stub_clock_gettime || defined __stub___clock_gettime
| choke me
| #endif
| 
| int
| main ()
| {
| return clock_gettime ();
|   ;
|   return 0;
| }
configure:12101: result: no
configure:12109: checking for clock_gettime in -lrt
configure:12134: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lrt  -lpthread -ldl  -lutil >&5
configure:12134: $? = 0
configure:12143: result: yes
configure:12163: checking for clock_getres
configure:12163: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:12163: $? = 0
configure:12163: result: yes
configure:12219: checking for major
configure:12242: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:12242: $? = 0
configure:12247: result: yes
configure:12261: checking for getaddrinfo
configure:12279: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:12279: $? = 0
configure:12286: result: yes
configure:12290: checking getaddrinfo bug
configure:12394: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:12394: $? = 0
configure:12394: ./conftest
configure:12394: $? = 0
configure:12407: result: no
configure:12426: checking for getnameinfo
configure:12426: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:12426: $? = 0
configure:12426: result: yes
configure:12437: checking whether time.h and sys/time.h may both be included
configure:12457: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12457: $? = 0
configure:12464: result: yes
configure:12472: checking whether struct tm is in sys/time.h or time.h
configure:12492: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12492: $? = 0
configure:12499: result: time.h
configure:12507: checking for struct tm.tm_zone
configure:12507: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12507: $? = 0
configure:12507: result: yes
configure:12574: checking for struct stat.st_rdev
configure:12574: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12574: $? = 0
configure:12574: result: yes
configure:12584: checking for struct stat.st_blksize
configure:12584: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12584: $? = 0
configure:12584: result: yes
configure:12594: checking for struct stat.st_flags
configure:12594: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:339: error: 'struct stat' has no member named 'st_flags'
configure:12594: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| static struct stat ac_aggr;
| if (ac_aggr.st_flags)
| return 0;
|   ;
|   return 0;
| }
configure:12594: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:339: error: 'struct stat' has no member named 'st_flags'
configure:12594: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| static struct stat ac_aggr;
| if (sizeof ac_aggr.st_flags)
| return 0;
|   ;
|   return 0;
| }
configure:12594: result: no
configure:12604: checking for struct stat.st_gen
configure:12604: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:339: error: 'struct stat' has no member named 'st_gen'
configure:12604: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| static struct stat ac_aggr;
| if (ac_aggr.st_gen)
| return 0;
|   ;
|   return 0;
| }
configure:12604: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:339: error: 'struct stat' has no member named 'st_gen'
configure:12604: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| static struct stat ac_aggr;
| if (sizeof ac_aggr.st_gen)
| return 0;
|   ;
|   return 0;
| }
configure:12604: result: no
configure:12614: checking for struct stat.st_birthtime
configure:12614: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:339: error: 'struct stat' has no member named 'st_birthtime'
configure:12614: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| static struct stat ac_aggr;
| if (ac_aggr.st_birthtime)
| return 0;
|   ;
|   return 0;
| }
configure:12614: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:339: error: 'struct stat' has no member named 'st_birthtime'
configure:12614: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| /* end confdefs.h.  */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| #  include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| #  include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| static struct stat ac_aggr;
| if (sizeof ac_aggr.st_birthtime)
| return 0;
|   ;
|   return 0;
| }
configure:12614: result: no
configure:12624: checking for struct stat.st_blocks
configure:12624: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12624: $? = 0
configure:12624: result: yes
configure:12645: checking for time.h that defines altzone
configure:12662: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:308: error: 'altzone' undeclared (first use in this function)
conftest.c:308: error: (Each undeclared identifier is reported only once
conftest.c:308: error: for each function it appears in.)
configure:12662: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| /* end confdefs.h.  */
| #include <time.h>
| int
| main ()
| {
| return altzone;
|   ;
|   return 0;
| }
configure:12671: result: no
configure:12680: checking whether sys/select.h and sys/time.h may both be included
configure:12697: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12697: $? = 0
configure:12706: result: yes
configure:12709: checking for addrinfo
configure:12725: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12725: $? = 0
configure:12733: result: yes
configure:12741: checking for sockaddr_storage
configure:12759: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12759: $? = 0
configure:12767: result: yes
configure:12777: checking whether char is unsigned
configure:12796: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12796: $? = 0
configure:12803: result: no
configure:12810: checking for an ANSI C-conforming const
configure:12876: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12876: $? = 0
configure:12883: result: yes
configure:12893: checking for working volatile
configure:12906: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12906: $? = 0
configure:12915: result: yes
configure:12919: checking for working signed char
configure:12932: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12932: $? = 0
configure:12941: result: yes
configure:12945: checking for prototypes
configure:12958: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12958: $? = 0
configure:12965: result: yes
configure:12969: checking for variable length prototypes and stdarg.h
configure:12992: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:12992: $? = 0
configure:13001: result: yes
configure:13005: checking for socketpair
configure:13021: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:13021: $? = 0
configure:13025: result: yes
configure:13035: checking if sockaddr has sa_len member
configure:13050: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:316: error: 'struct sockaddr' has no member named 'sa_len'
configure:13050: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| /* end confdefs.h.  */
| #include <sys/types.h>
| #include <sys/socket.h>
| int
| main ()
| {
| struct sockaddr x;
| x.sa_len = 0;
|   ;
|   return 0;
| }
configure:13057: result: no
configure:13064: checking whether va_list is an array
configure:13083: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:320: error: incompatible types when assigning to type 'va_list' from type 'struct __va_list_tag *'
configure:13083: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| /* end confdefs.h.  */
| 
| #ifdef HAVE_STDARG_PROTOTYPES
| #include <stdarg.h>
| #else
| #include <varargs.h>
| #endif
| 
| int
| main ()
| {
| va_list list1, list2; list1 = list2;
|   ;
|   return 0;
| }
configure:13094: result: yes
configure:13100: checking for gethostbyname_r
configure:13100: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:13100: $? = 0
configure:13100: result: yes
configure:13105: checking gethostbyname_r with 6 args
configure:13130: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2    -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:13130: $? = 0
configure:13137: result: yes
configure:13253: checking for __fpu_control
configure:13253: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:13253: $? = 0
configure:13253: result: yes
configure:13307: checking for --with-fpectl
configure:13324: result: no
configure:13335: checking for --with-libm=STRING
configure:13352: result: default LIBM="-lm"
configure:13359: checking for --with-libc=STRING
configure:13376: result: default LIBC=""
configure:13385: checking for x64 gcc inline assembler
configure:13400: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:13400: $? = 0
configure:13407: result: yes
configure:13420: checking whether C doubles are little-endian IEEE 754 binary64
configure:13442: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:13442: $? = 0
configure:13442: ./conftest
configure:13442: $? = 0
configure:13453: result: yes
configure:13462: checking whether C doubles are big-endian IEEE 754 binary64
configure:13484: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:13484: $? = 0
configure:13484: ./conftest
configure:13484: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| /* end confdefs.h.  */
| 
| #include <string.h>
| int main() {
|     double x = 9006104071832581.0;
|     if (memcmp(&x, "\x43\x3f\xff\x01\x02\x03\x04\x05", 8) == 0)
|         return 0;
|     else
|         return 1;
| }
| 
configure:13495: result: no
configure:13508: checking whether C doubles are ARM mixed-endian IEEE 754 binary64
configure:13530: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:13530: $? = 0
configure:13530: ./conftest
configure:13530: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| /* end confdefs.h.  */
| 
| #include <string.h>
| int main() {
|     double x = 9006104071832581.0;
|     if (memcmp(&x, "\x01\xff\x3f\x43\x05\x04\x03\x02", 8) == 0)
|         return 0;
|     else
|         return 1;
| }
| 
configure:13541: result: no
configure:13560: checking whether we can use gcc inline assembler to get and set x87 control word
configure:13577: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:13577: $? = 0
configure:13584: result: yes
configure:13593: checking whether we can use gcc inline assembler to get and set mc68881 fpcr
configure:13610: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
conftest.c: Assembler messages:
conftest.c:323: Error: no such instruction: `fmove.l %fpcr,%eax'
conftest.c:324: Error: no such instruction: `fmove.l %eax,%fpcr'
configure:13610: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| #define HAVE_GCC_ASM_FOR_X87 1
| /* end confdefs.h.  */
| 
| int
| main ()
| {
| 
|   unsigned int fpcr;
|   __asm__ __volatile__ ("fmove.l %%fpcr,%0" : "=g" (fpcr));
|   __asm__ __volatile__ ("fmove.l %0,%%fpcr" : : "g" (fpcr));
| 
|   ;
|   return 0;
| }
configure:13617: result: no
configure:13631: checking for x87-style double rounding
configure:13662: /usr/bin/gcc-4.4 -pthread  -Wno-unused-result -Wsign-compare -Wunreachable-code -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:13662: $? = 0
configure:13662: ./conftest
configure:13662: $? = 0
configure:13672: result: no
configure:13691: checking for acosh
configure:13691: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13691: $? = 0
configure:13691: result: yes
configure:13691: checking for asinh
configure:13691: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13691: $? = 0
configure:13691: result: yes
configure:13691: checking for atanh
configure:13691: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13691: $? = 0
configure:13691: result: yes
configure:13691: checking for copysign
configure:13691: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13691: $? = 0
configure:13691: result: yes
configure:13691: checking for erf
configure:13691: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13691: $? = 0
configure:13691: result: yes
configure:13691: checking for erfc
configure:13691: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13691: $? = 0
configure:13691: result: yes
configure:13691: checking for expm1
configure:13691: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13691: $? = 0
configure:13691: result: yes
configure:13691: checking for finite
configure:13691: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13691: $? = 0
configure:13691: result: yes
configure:13691: checking for gamma
configure:13691: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13691: $? = 0
configure:13691: result: yes
configure:13703: checking for hypot
configure:13703: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13703: $? = 0
configure:13703: result: yes
configure:13703: checking for lgamma
configure:13703: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13703: $? = 0
configure:13703: result: yes
configure:13703: checking for log1p
configure:13703: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13703: $? = 0
configure:13703: result: yes
configure:13703: checking for log2
configure:13703: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13703: $? = 0
configure:13703: result: yes
configure:13703: checking for round
configure:13703: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13703: $? = 0
configure:13703: result: yes
configure:13703: checking for tgamma
configure:13703: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13703: $? = 0
configure:13703: result: yes
configure:13712: checking whether isinf is declared
configure:13712: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:13712: $? = 0
configure:13712: result: yes
configure:13723: checking whether isnan is declared
configure:13723: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:13723: $? = 0
configure:13723: result: yes
configure:13734: checking whether isfinite is declared
configure:13734: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:13734: $? = 0
configure:13734: result: yes
configure:13749: checking whether tanh preserves the sign of zero
configure:13773: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13773: $? = 0
configure:13773: ./conftest
configure:13773: $? = 0
configure:13784: result: yes
configure:13797: checking whether log1p drops the sign of negative zero
configure:13821: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt -lm >&5
configure:13821: $? = 0
configure:13821: ./conftest
configure:13821: $? = 0
configure:13832: result: no
configure:13849: checking whether POSIX semaphores are enabled
configure:13878: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:13878: $? = 0
configure:13878: ./conftest
configure:13878: $? = 0
configure:13890: result: yes
configure:13900: checking for broken sem_getvalue
configure:13933: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:13933: $? = 0
configure:13933: ./conftest
configure:13933: $? = 0
configure:13945: result: no
configure:13955: checking digit size for Python's longs
configure:13978: result: no value specified
configure:13984: checking wchar.h usability
configure:13984: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:13984: $? = 0
configure:13984: result: yes
configure:13984: checking wchar.h presence
configure:13984: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:13984: $? = 0
configure:13984: result: yes
configure:13984: checking for wchar.h
configure:13984: result: yes
configure:14006: checking size of wchar_t
configure:14011: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:14011: $? = 0
configure:14011: ./conftest
configure:14011: $? = 0
configure:14026: result: 4
configure:14038: checking for UCS-4 tcl
configure:14056: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:339:17: error: tcl.h: No such file or directory
conftest.c:341:3: error: #error "NOT UCS4_TCL"
configure:14056: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| #define HAVE_GCC_ASM_FOR_X87 1
| #define HAVE_ACOSH 1
| #define HAVE_ASINH 1
| #define HAVE_ATANH 1
| #define HAVE_COPYSIGN 1
| #define HAVE_ERF 1
| #define HAVE_ERFC 1
| #define HAVE_EXPM1 1
| #define HAVE_FINITE 1
| #define HAVE_GAMMA 1
| #define HAVE_HYPOT 1
| #define HAVE_LGAMMA 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_ROUND 1
| #define HAVE_TGAMMA 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define TANH_PRESERVES_ZERO_SIGN 1
| #define HAVE_WCHAR_H 1
| #define SIZEOF_WCHAR_T 4
| /* end confdefs.h.  */
| 
| #include <tcl.h>
| #if TCL_UTF_MAX != 6
| # error "NOT UCS4_TCL"
| #endif
| int
| main ()
| {
| 
|   ;
|   return 0;
| }
configure:14065: result: no
configure:14072: checking whether wchar_t is signed
configure:14092: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:14092: $? = 0
configure:14092: ./conftest
configure:14092: $? = 0
configure:14103: result: yes
configure:14118: result: no usable wchar_t found
configure:14122: checking whether byte ordering is bigendian
configure:14137: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c:339: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'a'
configure:14137: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| #define HAVE_GCC_ASM_FOR_X87 1
| #define HAVE_ACOSH 1
| #define HAVE_ASINH 1
| #define HAVE_ATANH 1
| #define HAVE_COPYSIGN 1
| #define HAVE_ERF 1
| #define HAVE_ERFC 1
| #define HAVE_EXPM1 1
| #define HAVE_FINITE 1
| #define HAVE_GAMMA 1
| #define HAVE_HYPOT 1
| #define HAVE_LGAMMA 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_ROUND 1
| #define HAVE_TGAMMA 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define TANH_PRESERVES_ZERO_SIGN 1
| #define HAVE_WCHAR_H 1
| #define SIZEOF_WCHAR_T 4
| /* end confdefs.h.  */
| #ifndef __APPLE_CC__
| 	       not a universal capable compiler
| 	     #endif
| 	     typedef int dummy;
| 
configure:14182: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:14182: $? = 0
configure:14200: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:345: error: 'not' undeclared (first use in this function)
conftest.c:345: error: (Each undeclared identifier is reported only once
conftest.c:345: error: for each function it appears in.)
conftest.c:345: error: expected ';' before 'big'
configure:14200: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| #define HAVE_GCC_ASM_FOR_X87 1
| #define HAVE_ACOSH 1
| #define HAVE_ASINH 1
| #define HAVE_ATANH 1
| #define HAVE_COPYSIGN 1
| #define HAVE_ERF 1
| #define HAVE_ERFC 1
| #define HAVE_EXPM1 1
| #define HAVE_FINITE 1
| #define HAVE_GAMMA 1
| #define HAVE_HYPOT 1
| #define HAVE_LGAMMA 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_ROUND 1
| #define HAVE_TGAMMA 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define TANH_PRESERVES_ZERO_SIGN 1
| #define HAVE_WCHAR_H 1
| #define SIZEOF_WCHAR_T 4
| /* end confdefs.h.  */
| #include <sys/types.h>
| 		#include <sys/param.h>
| 
| int
| main ()
| {
| #if BYTE_ORDER != BIG_ENDIAN
| 		 not big endian
| 		#endif
| 
|   ;
|   return 0;
| }
configure:14328: result: no
configure:14362: checking ABIFLAGS
configure:14364: result: m
configure:14366: checking SOABI
configure:14369: result: cpython-35m-x86_64-linux-gnu
configure:14380: checking LDVERSION
configure:14383: result: $(VERSION)$(ABIFLAGS)
configure:14392: checking whether right shift extends the sign bit
configure:14410: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:14410: $? = 0
configure:14410: ./conftest
configure:14410: $? = 0
configure:14421: result: yes
configure:14431: checking for getc_unlocked() and friends
configure:14453: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:14453: $? = 0
configure:14462: result: yes
configure:14479: checking how to link readline libs
configure:14506: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lreadline -lpthread -ldl  -lutil -lrt >&5
configure:14506: $? = 0
configure:14521: result: -lreadline
configure:14529: checking for rl_callback_handler_install in -lreadline
configure:14554: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lreadline -lreadline -lreadline -lpthread -ldl  -lutil -lrt >&5
configure:14554: $? = 0
configure:14563: result: yes
configure:14577: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:14577: $? = 0
configure:14615: checking for rl_pre_input_hook in -lreadline
configure:14640: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lreadline -lreadline -lreadline -lpthread -ldl  -lutil -lrt >&5
configure:14640: $? = 0
configure:14649: result: yes
configure:14659: checking for rl_completion_display_matches_hook in -lreadline
configure:14684: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lreadline -lreadline -lreadline -lpthread -ldl  -lutil -lrt >&5
configure:14684: $? = 0
configure:14693: result: yes
configure:14703: checking for rl_completion_matches in -lreadline
configure:14728: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lreadline -lreadline -lreadline -lpthread -ldl  -lutil -lrt >&5
configure:14728: $? = 0
configure:14737: result: yes
configure:14751: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c
configure:14751: $? = 0
configure:14775: checking for append_history in -lreadline
configure:14800: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lreadline -lreadline -lreadline -lpthread -ldl  -lutil -lrt >&5
configure:14800: $? = 0
configure:14809: result: yes
configure:14821: checking for broken nice()
configure:14842: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:14842: $? = 0
configure:14842: ./conftest
configure:14842: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| #define HAVE_GCC_ASM_FOR_X87 1
| #define HAVE_ACOSH 1
| #define HAVE_ASINH 1
| #define HAVE_ATANH 1
| #define HAVE_COPYSIGN 1
| #define HAVE_ERF 1
| #define HAVE_ERFC 1
| #define HAVE_EXPM1 1
| #define HAVE_FINITE 1
| #define HAVE_GAMMA 1
| #define HAVE_HYPOT 1
| #define HAVE_LGAMMA 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_ROUND 1
| #define HAVE_TGAMMA 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define TANH_PRESERVES_ZERO_SIGN 1
| #define HAVE_WCHAR_H 1
| #define SIZEOF_WCHAR_T 4
| #define HAVE_GETC_UNLOCKED 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_RL_CALLBACK 1
| #define HAVE_RL_COMPLETION_APPEND_CHARACTER 1
| #define HAVE_RL_COMPLETION_SUPPRESS_APPEND 1
| #define HAVE_RL_PRE_INPUT_HOOK 1
| #define HAVE_RL_COMPLETION_DISPLAY_MATCHES_HOOK 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define HAVE_RL_CATCH_SIGNAL 1
| #define HAVE_RL_APPEND_HISTORY 1
| /* end confdefs.h.  */
| 
| int main()
| {
| 	int val1 = nice(1);
| 	if (val1 != -1 && val1 == nice(2))
| 		exit(0);
| 	exit(1);
| }
| 
configure:14853: result: no
configure:14862: checking for broken poll()
configure:14892: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:14892: $? = 0
configure:14892: ./conftest
configure:14892: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| #define HAVE_GCC_ASM_FOR_X87 1
| #define HAVE_ACOSH 1
| #define HAVE_ASINH 1
| #define HAVE_ATANH 1
| #define HAVE_COPYSIGN 1
| #define HAVE_ERF 1
| #define HAVE_ERFC 1
| #define HAVE_EXPM1 1
| #define HAVE_FINITE 1
| #define HAVE_GAMMA 1
| #define HAVE_HYPOT 1
| #define HAVE_LGAMMA 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_ROUND 1
| #define HAVE_TGAMMA 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define TANH_PRESERVES_ZERO_SIGN 1
| #define HAVE_WCHAR_H 1
| #define SIZEOF_WCHAR_T 4
| #define HAVE_GETC_UNLOCKED 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_RL_CALLBACK 1
| #define HAVE_RL_COMPLETION_APPEND_CHARACTER 1
| #define HAVE_RL_COMPLETION_SUPPRESS_APPEND 1
| #define HAVE_RL_PRE_INPUT_HOOK 1
| #define HAVE_RL_COMPLETION_DISPLAY_MATCHES_HOOK 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define HAVE_RL_CATCH_SIGNAL 1
| #define HAVE_RL_APPEND_HISTORY 1
| /* end confdefs.h.  */
| 
| #include <poll.h>
| 
| int main()
| {
|     struct pollfd poll_struct = { 42, POLLIN|POLLPRI|POLLOUT, 0 };
|     int poll_test;
| 
|     close (42);
| 
|     poll_test = poll(&poll_struct, 1, 0);
|     if (poll_test < 0)
|         return 0;
|     else if (poll_test == 0 && poll_struct.revents != POLLNVAL)
|         return 0;
|     else
|         return 1;
| }
| 
configure:14903: result: no
configure:14915: checking for struct tm.tm_zone
configure:14915: result: yes
configure:14984: checking for working tzset()
configure:15060: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:15060: $? = 0
configure:15060: ./conftest
configure:15060: $? = 0
configure:15071: result: yes
configure:15081: checking for tv_nsec in struct stat
configure:15100: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:15100: $? = 0
configure:15108: result: yes
configure:15118: checking for tv_nsec2 in struct stat
configure:15137: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:358: error: 'struct stat' has no member named 'st_mtimespec'
configure:15137: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| #define HAVE_GCC_ASM_FOR_X87 1
| #define HAVE_ACOSH 1
| #define HAVE_ASINH 1
| #define HAVE_ATANH 1
| #define HAVE_COPYSIGN 1
| #define HAVE_ERF 1
| #define HAVE_ERFC 1
| #define HAVE_EXPM1 1
| #define HAVE_FINITE 1
| #define HAVE_GAMMA 1
| #define HAVE_HYPOT 1
| #define HAVE_LGAMMA 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_ROUND 1
| #define HAVE_TGAMMA 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define TANH_PRESERVES_ZERO_SIGN 1
| #define HAVE_WCHAR_H 1
| #define SIZEOF_WCHAR_T 4
| #define HAVE_GETC_UNLOCKED 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_RL_CALLBACK 1
| #define HAVE_RL_COMPLETION_APPEND_CHARACTER 1
| #define HAVE_RL_COMPLETION_SUPPRESS_APPEND 1
| #define HAVE_RL_PRE_INPUT_HOOK 1
| #define HAVE_RL_COMPLETION_DISPLAY_MATCHES_HOOK 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define HAVE_RL_CATCH_SIGNAL 1
| #define HAVE_RL_APPEND_HISTORY 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_WORKING_TZSET 1
| #define HAVE_STAT_TV_NSEC 1
| /* end confdefs.h.  */
| #include <sys/stat.h>
| int
| main ()
| {
| 
| struct stat st;
| st.st_mtimespec.tv_nsec = 1;
| 
|   ;
|   return 0;
| }
configure:15145: result: no
configure:15161: checking curses.h usability
configure:15161: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -I/usr/include/ncursesw conftest.c >&5
configure:15161: $? = 0
configure:15161: result: yes
configure:15161: checking curses.h presence
configure:15161: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -I/usr/include/ncursesw conftest.c
configure:15161: $? = 0
configure:15161: result: yes
configure:15161: checking for curses.h
configure:15161: result: yes
configure:15161: checking ncurses.h usability
configure:15161: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -I/usr/include/ncursesw conftest.c >&5
configure:15161: $? = 0
configure:15161: result: yes
configure:15161: checking ncurses.h presence
configure:15161: /usr/bin/gcc-4.4 -E -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -I/usr/include/ncursesw conftest.c
configure:15161: $? = 0
configure:15161: result: yes
configure:15161: checking for ncurses.h
configure:15161: result: yes
configure:15175: checking for term.h
configure:15175: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -I/usr/include/ncursesw conftest.c >&5
configure:15175: $? = 0
configure:15175: result: yes
configure:15192: checking whether mvwdelch is an expression
configure:15211: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -I/usr/include/ncursesw conftest.c >&5
configure:15211: $? = 0
configure:15219: result: yes
configure:15229: checking whether WINDOW has _flags
configure:15248: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -I/usr/include/ncursesw conftest.c >&5
configure:15248: $? = 0
configure:15256: result: yes
configure:15267: checking for is_term_resized
configure:15280: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -I/usr/include/ncursesw conftest.c >&5
configure:15280: $? = 0
configure:15284: result: yes
configure:15293: checking for resize_term
configure:15306: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -I/usr/include/ncursesw conftest.c >&5
configure:15306: $? = 0
configure:15310: result: yes
configure:15319: checking for resizeterm
configure:15332: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -I/usr/include/ncursesw conftest.c >&5
configure:15332: $? = 0
configure:15336: result: yes
configure:15347: checking for device files
configure:15367: checking for /dev/ptmx
configure:15380: result: yes
configure:15391: checking for /dev/ptc
configure:15404: result: no
configure:15418: checking for %lld and %llu printf() format support
configure:15489: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:15489: $? = 0
configure:15489: ./conftest
configure:15489: $? = 0
configure:15501: result: yes
configure:15517: checking for %zd printf() format support
configure:15565: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:15565: $? = 0
configure:15565: ./conftest
configure:15565: $? = 0
configure:15575: result: yes
configure:15583: checking for socklen_t
configure:15583: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:15583: $? = 0
configure:15583: /usr/bin/gcc-4.4 -pthread -c -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:375: error: expected expression before ')' token
configure:15583: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| #define HAVE_GCC_ASM_FOR_X87 1
| #define HAVE_ACOSH 1
| #define HAVE_ASINH 1
| #define HAVE_ATANH 1
| #define HAVE_COPYSIGN 1
| #define HAVE_ERF 1
| #define HAVE_ERFC 1
| #define HAVE_EXPM1 1
| #define HAVE_FINITE 1
| #define HAVE_GAMMA 1
| #define HAVE_HYPOT 1
| #define HAVE_LGAMMA 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_ROUND 1
| #define HAVE_TGAMMA 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define TANH_PRESERVES_ZERO_SIGN 1
| #define HAVE_WCHAR_H 1
| #define SIZEOF_WCHAR_T 4
| #define HAVE_GETC_UNLOCKED 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_RL_CALLBACK 1
| #define HAVE_RL_COMPLETION_APPEND_CHARACTER 1
| #define HAVE_RL_COMPLETION_SUPPRESS_APPEND 1
| #define HAVE_RL_PRE_INPUT_HOOK 1
| #define HAVE_RL_COMPLETION_DISPLAY_MATCHES_HOOK 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define HAVE_RL_CATCH_SIGNAL 1
| #define HAVE_RL_APPEND_HISTORY 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_WORKING_TZSET 1
| #define HAVE_STAT_TV_NSEC 1
| #define HAVE_CURSES_H 1
| #define HAVE_NCURSES_H 1
| #define HAVE_TERM_H 1
| #define MVWDELCH_IS_EXPRESSION 1
| #define WINDOW_HAS_FLAGS 1
| #define HAVE_CURSES_IS_TERM_RESIZED 1
| #define HAVE_CURSES_RESIZE_TERM 1
| #define HAVE_CURSES_RESIZETERM 1
| #define HAVE_DEV_PTMX 1
| #define PY_FORMAT_LONG_LONG "ll"
| #define PY_FORMAT_SIZE_T "z"
| /* end confdefs.h.  */
| 
| #ifdef HAVE_SYS_TYPES_H
| #include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_SOCKET_H
| #include <sys/socket.h>
| #endif
| 
| 
| int
| main ()
| {
| if (sizeof ((socklen_t)))
| 	    return 0;
|   ;
|   return 0;
| }
configure:15583: result: yes
configure:15601: checking for broken mbstowcs
configure:15622: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:15622: $? = 0
configure:15622: ./conftest
configure:15622: $? = 0
configure:15633: result: no
configure:15643: checking for --with-computed-gotos
configure:15667: result: no value specified
configure:15672: checking whether /usr/bin/gcc-4.4 -pthread supports computed gotos
configure:15699: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:15699: $? = 0
configure:15699: ./conftest
configure:15699: $? = 0
configure:15710: result: yes
configure:15735: checking for build directories
configure:15742: result: done
configure:15746: checking for -O2
configure:15762: /usr/bin/gcc-4.4 -pthread -c -O2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include conftest.c >&5
configure:15762: $? = 0
configure:15768: result: yes
configure:15774: checking for glibc _FORTIFY_SOURCE/memmove bug
configure:15803: /usr/bin/gcc-4.4 -pthread -o conftest -O2 -D_FORTIFY_SOURCE=2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:15803: $? = 0
configure:15803: ./conftest
configure:15803: $? = 0
configure:15813: result: no
configure:15827: checking for gcc ipa-pure-const bug
configure:15854: /usr/bin/gcc-4.4 -pthread -o conftest -O2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:15854: $? = 0
configure:15854: ./conftest
configure:15854: $? = 0
configure:15864: result: no
configure:15876: checking for stdatomic.h
configure:15892: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
conftest.c:366:27: error: stdatomic.h: No such file or directory
conftest.c:367: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'value'
conftest.c:368: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'void'
conftest.c: In function 'main':
conftest.c:370: error: 'value' undeclared (first use in this function)
conftest.c:370: error: (Each undeclared identifier is reported only once
conftest.c:370: error: for each function it appears in.)
configure:15892: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| #define HAVE_GCC_ASM_FOR_X87 1
| #define HAVE_ACOSH 1
| #define HAVE_ASINH 1
| #define HAVE_ATANH 1
| #define HAVE_COPYSIGN 1
| #define HAVE_ERF 1
| #define HAVE_ERFC 1
| #define HAVE_EXPM1 1
| #define HAVE_FINITE 1
| #define HAVE_GAMMA 1
| #define HAVE_HYPOT 1
| #define HAVE_LGAMMA 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_ROUND 1
| #define HAVE_TGAMMA 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define TANH_PRESERVES_ZERO_SIGN 1
| #define HAVE_WCHAR_H 1
| #define SIZEOF_WCHAR_T 4
| #define HAVE_GETC_UNLOCKED 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_RL_CALLBACK 1
| #define HAVE_RL_COMPLETION_APPEND_CHARACTER 1
| #define HAVE_RL_COMPLETION_SUPPRESS_APPEND 1
| #define HAVE_RL_PRE_INPUT_HOOK 1
| #define HAVE_RL_COMPLETION_DISPLAY_MATCHES_HOOK 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define HAVE_RL_CATCH_SIGNAL 1
| #define HAVE_RL_APPEND_HISTORY 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_WORKING_TZSET 1
| #define HAVE_STAT_TV_NSEC 1
| #define HAVE_CURSES_H 1
| #define HAVE_NCURSES_H 1
| #define HAVE_TERM_H 1
| #define MVWDELCH_IS_EXPRESSION 1
| #define WINDOW_HAS_FLAGS 1
| #define HAVE_CURSES_IS_TERM_RESIZED 1
| #define HAVE_CURSES_RESIZE_TERM 1
| #define HAVE_CURSES_RESIZETERM 1
| #define HAVE_DEV_PTMX 1
| #define PY_FORMAT_LONG_LONG "ll"
| #define PY_FORMAT_SIZE_T "z"
| #define HAVE_COMPUTED_GOTOS 1
| /* end confdefs.h.  */
| 
| 
|     #include <stdatomic.h>
|     atomic_int value = ATOMIC_VAR_INIT(1);
|     _Atomic void *py_atomic_address = (void*) &value;
|     int main() {
|       int loaded_value = atomic_load(&value);
|       return 0;
|     }
| 
| 
configure:15900: result: no
configure:15910: checking for GCC >= 4.7 __atomic builtins
configure:15924: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
conftest.c: In function 'main':
conftest.c:368: error: '__ATOMIC_SEQ_CST' undeclared (first use in this function)
conftest.c:368: error: (Each undeclared identifier is reported only once
conftest.c:368: error: for each function it appears in.)
configure:15924: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| #define HAVE_GCC_ASM_FOR_X87 1
| #define HAVE_ACOSH 1
| #define HAVE_ASINH 1
| #define HAVE_ATANH 1
| #define HAVE_COPYSIGN 1
| #define HAVE_ERF 1
| #define HAVE_ERFC 1
| #define HAVE_EXPM1 1
| #define HAVE_FINITE 1
| #define HAVE_GAMMA 1
| #define HAVE_HYPOT 1
| #define HAVE_LGAMMA 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_ROUND 1
| #define HAVE_TGAMMA 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define TANH_PRESERVES_ZERO_SIGN 1
| #define HAVE_WCHAR_H 1
| #define SIZEOF_WCHAR_T 4
| #define HAVE_GETC_UNLOCKED 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_RL_CALLBACK 1
| #define HAVE_RL_COMPLETION_APPEND_CHARACTER 1
| #define HAVE_RL_COMPLETION_SUPPRESS_APPEND 1
| #define HAVE_RL_PRE_INPUT_HOOK 1
| #define HAVE_RL_COMPLETION_DISPLAY_MATCHES_HOOK 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define HAVE_RL_CATCH_SIGNAL 1
| #define HAVE_RL_APPEND_HISTORY 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_WORKING_TZSET 1
| #define HAVE_STAT_TV_NSEC 1
| #define HAVE_CURSES_H 1
| #define HAVE_NCURSES_H 1
| #define HAVE_TERM_H 1
| #define MVWDELCH_IS_EXPRESSION 1
| #define WINDOW_HAS_FLAGS 1
| #define HAVE_CURSES_IS_TERM_RESIZED 1
| #define HAVE_CURSES_RESIZE_TERM 1
| #define HAVE_CURSES_RESIZETERM 1
| #define HAVE_DEV_PTMX 1
| #define PY_FORMAT_LONG_LONG "ll"
| #define PY_FORMAT_SIZE_T "z"
| #define HAVE_COMPUTED_GOTOS 1
| /* end confdefs.h.  */
| 
| 
|     volatile int val = 1;
|     int main() {
|       __atomic_load_n(&val, __ATOMIC_SEQ_CST);
|       return 0;
|     }
| 
| 
configure:15932: result: no
configure:15942: checking for ensurepip
configure:15962: result: no
configure:15967: checking if the dirent structure of a d_type field
configure:15982: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
configure:15982: $? = 0
configure:15989: result: yes
configure:15999: checking for the Linux getrandom() syscall
configure:16018: /usr/bin/gcc-4.4 -pthread -o conftest -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib conftest.c -lpthread -ldl  -lutil -lrt >&5
conftest.c: In function 'main':
conftest.c:374: error: 'SYS_getrandom' undeclared (first use in this function)
conftest.c:374: error: (Each undeclared identifier is reported only once
conftest.c:374: error: for each function it appears in.)
configure:16018: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define _GNU_SOURCE 1
| #define _NETBSD_SOURCE 1
| #define __BSD_VISIBLE 1
| #define _BSD_TYPES 1
| #define _DARWIN_C_SOURCE 1
| #define _XOPEN_SOURCE 700
| #define _XOPEN_SOURCE_EXTENDED 1
| #define _POSIX_C_SOURCE 200809L
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define USE_INLINE 1
| #define Py_ENABLE_SHARED 1
| #define STDC_HEADERS 1
| #define HAVE_ASM_TYPES_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GRP_H 1
| #define HAVE_LANGINFO_H 1
| #define HAVE_LIBINTL_H 1
| #define HAVE_PTHREAD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_SHADOW_H 1
| #define HAVE_SIGNAL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STROPTS_H 1
| #define HAVE_TERMIOS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_POLL_H 1
| #define HAVE_SYS_EPOLL_H 1
| #define HAVE_SYS_POLL_H 1
| #define HAVE_SYS_XATTR_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SENDFILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STATVFS_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SYSCALL_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_UIO_H 1
| #define HAVE_SYS_UN_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_PTY_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_NETPACKET_PACKET_H 1
| #define HAVE_SYSEXITS_H 1
| #define HAVE_LINUX_TIPC_H 1
| #define HAVE_SPAWN_H 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ENDIAN_H 1
| #define HAVE_DIRENT_H 1
| #define HAVE_NET_IF_H 1
| #define HAVE_LINUX_NETLINK_H 1
| #define HAVE_LINUX_CAN_H 1
| #define HAVE_LINUX_CAN_RAW_H 1
| #define HAVE_MAKEDEV 1
| #define HAVE_HTOLE64 1
| #define _LARGEFILE_SOURCE 1
| #define _FILE_OFFSET_BITS 64
| #if defined(SCO_DS)
| #undef _OFF_T
| #endif
| #define RETSIGTYPE void
| #define HAVE_UINT32_T 1
| #define HAVE_UINT64_T 1
| #define HAVE_INT32_T 1
| #define HAVE_INT64_T 1
| #define HAVE_SSIZE_T 1
| #define HAVE_GCC_UINT128_T 1
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_SHORT 2
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_FPOS_T 16
| #define SIZEOF_SIZE_T 8
| #define SIZEOF_PID_T 4
| #define HAVE_LONG_LONG 1
| #define SIZEOF_LONG_LONG 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| #define HAVE_C99_BOOL 1
| #define SIZEOF__BOOL 1
| #define HAVE_UINTPTR_T 1
| #define SIZEOF_UINTPTR_T 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_TIME_T 8
| #define SIZEOF_PTHREAD_T 8
| #define HAVE_LIBDL 1
| #define HAVE_RAND_EGD 1
| #define WITH_THREAD 1
| #define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
| #define HAVE_PTHREAD_SIGMASK 1
| #define HAVE_PTHREAD_ATFORK 1
| #define ENABLE_IPV6 1
| #define WITH_DOC_STRINGS 1
| #define WITH_PYMALLOC 1
| #define HAVE_DLOPEN 1
| #define HAVE_DYNAMIC_LOADING 1
| #define HAVE_ALARM 1
| #define HAVE_ACCEPT4 1
| #define HAVE_SETITIMER 1
| #define HAVE_GETITIMER 1
| #define HAVE_BIND_TEXTDOMAIN_CODESET 1
| #define HAVE_CHOWN 1
| #define HAVE_CLOCK 1
| #define HAVE_CONFSTR 1
| #define HAVE_CTERMID 1
| #define HAVE_DUP3 1
| #define HAVE_EXECV 1
| #define HAVE_FACCESSAT 1
| #define HAVE_FCHMOD 1
| #define HAVE_FCHMODAT 1
| #define HAVE_FCHOWN 1
| #define HAVE_FCHOWNAT 1
| #define HAVE_FEXECVE 1
| #define HAVE_FDOPENDIR 1
| #define HAVE_FORK 1
| #define HAVE_FPATHCONF 1
| #define HAVE_FSTATAT 1
| #define HAVE_FTIME 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_FUTIMESAT 1
| #define HAVE_FUTIMENS 1
| #define HAVE_FUTIMES 1
| #define HAVE_GAI_STRERROR 1
| #define HAVE_GETGROUPLIST 1
| #define HAVE_GETGROUPS 1
| #define HAVE_GETLOGIN 1
| #define HAVE_GETLOADAVG 1
| #define HAVE_GETPEERNAME 1
| #define HAVE_GETPGID 1
| #define HAVE_GETPID 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_GETRESUID 1
| #define HAVE_GETRESGID 1
| #define HAVE_GETPWENT 1
| #define HAVE_GETSPNAM 1
| #define HAVE_GETSPENT 1
| #define HAVE_GETSID 1
| #define HAVE_GETWD 1
| #define HAVE_IF_NAMEINDEX 1
| #define HAVE_INITGROUPS 1
| #define HAVE_KILL 1
| #define HAVE_KILLPG 1
| #define HAVE_LCHOWN 1
| #define HAVE_LOCKF 1
| #define HAVE_LINKAT 1
| #define HAVE_LSTAT 1
| #define HAVE_LUTIMES 1
| #define HAVE_MMAP 1
| #define HAVE_MEMRCHR 1
| #define HAVE_MBRTOWC 1
| #define HAVE_MKDIRAT 1
| #define HAVE_MKFIFO 1
| #define HAVE_MKFIFOAT 1
| #define HAVE_MKNOD 1
| #define HAVE_MKNODAT 1
| #define HAVE_MKTIME 1
| #define HAVE_MREMAP 1
| #define HAVE_NICE 1
| #define HAVE_OPENAT 1
| #define HAVE_PATHCONF 1
| #define HAVE_PAUSE 1
| #define HAVE_PIPE2 1
| #define HAVE_POLL 1
| #define HAVE_POSIX_FALLOCATE 1
| #define HAVE_POSIX_FADVISE 1
| #define HAVE_PREAD 1
| #define HAVE_PTHREAD_KILL 1
| #define HAVE_PUTENV 1
| #define HAVE_PWRITE 1
| #define HAVE_READLINK 1
| #define HAVE_READLINKAT 1
| #define HAVE_READV 1
| #define HAVE_REALPATH 1
| #define HAVE_RENAMEAT 1
| #define HAVE_SELECT 1
| #define HAVE_SEM_OPEN 1
| #define HAVE_SEM_TIMEDWAIT 1
| #define HAVE_SEM_GETVALUE 1
| #define HAVE_SEM_UNLINK 1
| #define HAVE_SENDFILE 1
| #define HAVE_SETEGID 1
| #define HAVE_SETEUID 1
| #define HAVE_SETGID 1
| #define HAVE_SETHOSTNAME 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SETREGID 1
| #define HAVE_SETREUID 1
| #define HAVE_SETRESUID 1
| #define HAVE_SETRESGID 1
| #define HAVE_SETSID 1
| #define HAVE_SETPGID 1
| #define HAVE_SETPGRP 1
| #define HAVE_SETPRIORITY 1
| #define HAVE_SETUID 1
| #define HAVE_SETVBUF 1
| #define HAVE_SCHED_GET_PRIORITY_MAX 1
| #define HAVE_SCHED_SETAFFINITY 1
| #define HAVE_SCHED_SETSCHEDULER 1
| #define HAVE_SCHED_SETPARAM 1
| #define HAVE_SCHED_RR_GET_INTERVAL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGINTERRUPT 1
| #define HAVE_SIGPENDING 1
| #define HAVE_SIGRELSE 1
| #define HAVE_SIGTIMEDWAIT 1
| #define HAVE_SIGWAIT 1
| #define HAVE_SIGWAITINFO 1
| #define HAVE_SNPRINTF 1
| #define HAVE_STRFTIME 1
| #define HAVE_SYMLINKAT 1
| #define HAVE_SYNC 1
| #define HAVE_SYSCONF 1
| #define HAVE_TCGETPGRP 1
| #define HAVE_TCSETPGRP 1
| #define HAVE_TEMPNAM 1
| #define HAVE_TIMEGM 1
| #define HAVE_TIMES 1
| #define HAVE_TMPFILE 1
| #define HAVE_TMPNAM 1
| #define HAVE_TMPNAM_R 1
| #define HAVE_TRUNCATE 1
| #define HAVE_UNAME 1
| #define HAVE_UNLINKAT 1
| #define HAVE_UNSETENV 1
| #define HAVE_UTIMENSAT 1
| #define HAVE_UTIMES 1
| #define HAVE_WAITID 1
| #define HAVE_WAITPID 1
| #define HAVE_WAIT3 1
| #define HAVE_WAIT4 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSXFRM 1
| #define HAVE_WMEMCMP 1
| #define HAVE_WRITEV 1
| #define HAVE_DIRFD 1
| #define HAVE_CHROOT 1
| #define HAVE_LINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_FCHDIR 1
| #define HAVE_FSYNC 1
| #define HAVE_FDATASYNC 1
| #define HAVE_EPOLL 1
| #define HAVE_EPOLL_CREATE1 1
| #define HAVE_FLOCK 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_ZLIB_COPY 1
| #define HAVE_HSTRERROR 1
| #define HAVE_INET_ATON 1
| #define HAVE_INET_PTON 1
| #define HAVE_SETGROUPS 1
| #define HAVE_OPENPTY 1
| #define HAVE_FORKPTY 1
| #define HAVE_MEMMOVE 1
| #define HAVE_FSEEKO 1
| #define HAVE_FSTATVFS 1
| #define HAVE_FTELLO 1
| #define HAVE_STATVFS 1
| #define HAVE_DUP2 1
| #define HAVE_STRDUP 1
| #define HAVE_GETPGRP 1
| #define HAVE_SETPGRP 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_CLOCK_GETTIME 1
| #define TIMEMODULE_LIB rt
| #define HAVE_CLOCK_GETRES 1
| #define HAVE_DEVICE_MACROS 1
| #define HAVE_GETADDRINFO 1
| #define HAVE_GETNAMEINFO 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_STAT_ST_RDEV 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_STRUCT_STAT_ST_BLOCKS 1
| #define HAVE_ST_BLOCKS 1
| #define SYS_SELECT_WITH_SYS_TIME 1
| #define HAVE_ADDRINFO 1
| #define HAVE_SOCKADDR_STORAGE 1
| #define HAVE_PROTOTYPES 1
| #define HAVE_STDARG_PROTOTYPES 1
| #define HAVE_SOCKETPAIR 1
| #define VA_LIST_IS_ARRAY 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R 1
| #define HAVE_GETHOSTBYNAME_R_6_ARG 1
| #define HAVE_GCC_ASM_FOR_X64 1
| #define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
| #define HAVE_GCC_ASM_FOR_X87 1
| #define HAVE_ACOSH 1
| #define HAVE_ASINH 1
| #define HAVE_ATANH 1
| #define HAVE_COPYSIGN 1
| #define HAVE_ERF 1
| #define HAVE_ERFC 1
| #define HAVE_EXPM1 1
| #define HAVE_FINITE 1
| #define HAVE_GAMMA 1
| #define HAVE_HYPOT 1
| #define HAVE_LGAMMA 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_ROUND 1
| #define HAVE_TGAMMA 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define TANH_PRESERVES_ZERO_SIGN 1
| #define HAVE_WCHAR_H 1
| #define SIZEOF_WCHAR_T 4
| #define HAVE_GETC_UNLOCKED 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_RL_CALLBACK 1
| #define HAVE_RL_COMPLETION_APPEND_CHARACTER 1
| #define HAVE_RL_COMPLETION_SUPPRESS_APPEND 1
| #define HAVE_RL_PRE_INPUT_HOOK 1
| #define HAVE_RL_COMPLETION_DISPLAY_MATCHES_HOOK 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define HAVE_RL_CATCH_SIGNAL 1
| #define HAVE_RL_APPEND_HISTORY 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_WORKING_TZSET 1
| #define HAVE_STAT_TV_NSEC 1
| #define HAVE_CURSES_H 1
| #define HAVE_NCURSES_H 1
| #define HAVE_TERM_H 1
| #define MVWDELCH_IS_EXPRESSION 1
| #define WINDOW_HAS_FLAGS 1
| #define HAVE_CURSES_IS_TERM_RESIZED 1
| #define HAVE_CURSES_RESIZE_TERM 1
| #define HAVE_CURSES_RESIZETERM 1
| #define HAVE_DEV_PTMX 1
| #define PY_FORMAT_LONG_LONG "ll"
| #define PY_FORMAT_SIZE_T "z"
| #define HAVE_COMPUTED_GOTOS 1
| #define HAVE_DIRENT_D_TYPE 1
| /* end confdefs.h.  */
| 
| 
|     #include <sys/syscall.h>
| 
|     int main() {
|         const int flags = 0;
|         char buffer[1];
|         int n;
|         /* ignore the result, Python checks for ENOSYS at runtime */
|         (void)syscall(SYS_getrandom, buffer, sizeof(buffer), flags);
|         return 0;
|     }
| 
| 
configure:16025: result: no
configure:16154: creating ./config.status

## ---------------------- ##
## Running config.status. ##
## ---------------------- ##

This file was extended by python config.status 3.5, which was
generated by GNU Autoconf 2.69.  Invocation command line was

  CONFIG_FILES    = 
  CONFIG_HEADERS  = 
  CONFIG_LINKS    = 
  CONFIG_COMMANDS = 
  $ ./config.status 

on dhunni

config.status:1269: creating Makefile.pre
config.status:1269: creating Modules/Setup.config
config.status:1269: creating Misc/python.pc
config.status:1269: creating Misc/python-config.sh
config.status:1269: creating Modules/ld_so_aix
config.status:1269: creating pyconfig.h

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_big_endian_double=no
ac_cv_broken_mbstowcs=no
ac_cv_broken_nice=no
ac_cv_broken_poll=no
ac_cv_broken_sem_getvalue=no
ac_cv_buggy_getaddrinfo=no
ac_cv_build=x86_64-unknown-linux-gnu
ac_cv_c_bigendian=no
ac_cv_c_char_unsigned=no
ac_cv_c_compiler_gnu=yes
ac_cv_c_const=yes
ac_cv_c_inline=inline
ac_cv_c_int32_t=yes
ac_cv_c_int64_t=yes
ac_cv_c_uint32_t=yes
ac_cv_c_uint64_t=yes
ac_cv_computed_gotos=yes
ac_cv_cxx_thread=yes
ac_cv_declaration_after_statement_warning=yes
ac_cv_disable_unused_result_warning=yes
ac_cv_enable_sign_compare_warning=yes
ac_cv_enable_unreachable_code_warning=yes
ac_cv_env_CC_set=set
ac_cv_env_CC_value=/usr/bin/gcc-4.4
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value='-Os -w -pipe -march=core2'
ac_cv_env_CPPFLAGS_set=set
ac_cv_env_CPPFLAGS_value=-isystem/exports/people/andersenlab/dec211/.linuxbrew/include
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value='-L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib'
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_MACHDEP_set=
ac_cv_env_MACHDEP_value=
ac_cv_env_PKG_CONFIG_LIBDIR_set=set
ac_cv_env_PKG_CONFIG_LIBDIR_value=/exports/people/andersenlab/dec211/.linuxbrew/lib/pkgconfig
ac_cv_env_PKG_CONFIG_PATH_set=
ac_cv_env_PKG_CONFIG_PATH_value=
ac_cv_env_PKG_CONFIG_set=
ac_cv_env_PKG_CONFIG_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_file__dev_ptc=no
ac_cv_file__dev_ptmx=yes
ac_cv_flock_decl=yes
ac_cv_func___fpu_control=yes
ac_cv_func__getpty=no
ac_cv_func_accept4=yes
ac_cv_func_acosh=yes
ac_cv_func_alarm=yes
ac_cv_func_asinh=yes
ac_cv_func_atanh=yes
ac_cv_func_bind_textdomain_codeset=yes
ac_cv_func_chown=yes
ac_cv_func_clock=yes
ac_cv_func_clock_getres=yes
ac_cv_func_clock_gettime=no
ac_cv_func_confstr=yes
ac_cv_func_copysign=yes
ac_cv_func_ctermid=yes
ac_cv_func_dlopen=yes
ac_cv_func_dup2=yes
ac_cv_func_dup3=yes
ac_cv_func_erf=yes
ac_cv_func_erfc=yes
ac_cv_func_execv=yes
ac_cv_func_expm1=yes
ac_cv_func_faccessat=yes
ac_cv_func_fchmod=yes
ac_cv_func_fchmodat=yes
ac_cv_func_fchown=yes
ac_cv_func_fchownat=yes
ac_cv_func_fdopendir=yes
ac_cv_func_fexecve=yes
ac_cv_func_finite=yes
ac_cv_func_flock=yes
ac_cv_func_fork=yes
ac_cv_func_forkpty=yes
ac_cv_func_fpathconf=yes
ac_cv_func_fseek64=no
ac_cv_func_fseeko=yes
ac_cv_func_fstatat=yes
ac_cv_func_fstatvfs=yes
ac_cv_func_ftell64=no
ac_cv_func_ftello=yes
ac_cv_func_ftime=yes
ac_cv_func_ftruncate=yes
ac_cv_func_futimens=yes
ac_cv_func_futimes=yes
ac_cv_func_futimesat=yes
ac_cv_func_gai_strerror=yes
ac_cv_func_gamma=yes
ac_cv_func_getentropy=no
ac_cv_func_getgrouplist=yes
ac_cv_func_getgroups=yes
ac_cv_func_gethostbyname_r=yes
ac_cv_func_getitimer=yes
ac_cv_func_getloadavg=yes
ac_cv_func_getlogin=yes
ac_cv_func_getnameinfo=yes
ac_cv_func_getpeername=yes
ac_cv_func_getpgid=yes
ac_cv_func_getpgrp=yes
ac_cv_func_getpid=yes
ac_cv_func_getpriority=yes
ac_cv_func_getpwent=yes
ac_cv_func_getresgid=yes
ac_cv_func_getresuid=yes
ac_cv_func_getsid=yes
ac_cv_func_getspent=yes
ac_cv_func_getspnam=yes
ac_cv_func_gettimeofday=yes
ac_cv_func_getwd=yes
ac_cv_func_hypot=yes
ac_cv_func_if_nameindex=yes
ac_cv_func_initgroups=yes
ac_cv_func_kill=yes
ac_cv_func_killpg=yes
ac_cv_func_lchmod=no
ac_cv_func_lchown=yes
ac_cv_func_lgamma=yes
ac_cv_func_linkat=yes
ac_cv_func_lockf=yes
ac_cv_func_log1p=yes
ac_cv_func_log2=yes
ac_cv_func_lstat=yes
ac_cv_func_lutimes=yes
ac_cv_func_mbrtowc=yes
ac_cv_func_memmove=yes
ac_cv_func_memrchr=yes
ac_cv_func_mkdirat=yes
ac_cv_func_mkfifo=yes
ac_cv_func_mkfifoat=yes
ac_cv_func_mknod=yes
ac_cv_func_mknodat=yes
ac_cv_func_mktime=yes
ac_cv_func_mmap=yes
ac_cv_func_mremap=yes
ac_cv_func_nice=yes
ac_cv_func_openat=yes
ac_cv_func_openpty=no
ac_cv_func_pathconf=yes
ac_cv_func_pause=yes
ac_cv_func_pipe2=yes
ac_cv_func_plock=no
ac_cv_func_poll=yes
ac_cv_func_posix_fadvise=yes
ac_cv_func_posix_fallocate=yes
ac_cv_func_pread=yes
ac_cv_func_pthread_atfork=yes
ac_cv_func_pthread_init=no
ac_cv_func_pthread_kill=yes
ac_cv_func_pthread_sigmask=yes
ac_cv_func_putenv=yes
ac_cv_func_pwrite=yes
ac_cv_func_readlink=yes
ac_cv_func_readlinkat=yes
ac_cv_func_readv=yes
ac_cv_func_realpath=yes
ac_cv_func_renameat=yes
ac_cv_func_round=yes
ac_cv_func_sched_get_priority_max=yes
ac_cv_func_sched_rr_get_interval=yes
ac_cv_func_sched_setaffinity=yes
ac_cv_func_sched_setparam=yes
ac_cv_func_sched_setscheduler=yes
ac_cv_func_select=yes
ac_cv_func_sem_getvalue=yes
ac_cv_func_sem_open=yes
ac_cv_func_sem_timedwait=yes
ac_cv_func_sem_unlink=yes
ac_cv_func_sendfile=yes
ac_cv_func_setegid=yes
ac_cv_func_seteuid=yes
ac_cv_func_setgid=yes
ac_cv_func_sethostname=yes
ac_cv_func_setitimer=yes
ac_cv_func_setlocale=yes
ac_cv_func_setpgid=yes
ac_cv_func_setpgrp=yes
ac_cv_func_setpriority=yes
ac_cv_func_setregid=yes
ac_cv_func_setresgid=yes
ac_cv_func_setresuid=yes
ac_cv_func_setreuid=yes
ac_cv_func_setsid=yes
ac_cv_func_setuid=yes
ac_cv_func_setvbuf=yes
ac_cv_func_sigaction=yes
ac_cv_func_sigaltstack=yes
ac_cv_func_siginterrupt=yes
ac_cv_func_sigpending=yes
ac_cv_func_sigrelse=yes
ac_cv_func_sigtimedwait=yes
ac_cv_func_sigwait=yes
ac_cv_func_sigwaitinfo=yes
ac_cv_func_snprintf=yes
ac_cv_func_statvfs=yes
ac_cv_func_strdup=yes
ac_cv_func_strftime=yes
ac_cv_func_strlcpy=no
ac_cv_func_symlinkat=yes
ac_cv_func_sync=yes
ac_cv_func_sysconf=yes
ac_cv_func_tcgetpgrp=yes
ac_cv_func_tcsetpgrp=yes
ac_cv_func_tempnam=yes
ac_cv_func_tgamma=yes
ac_cv_func_timegm=yes
ac_cv_func_times=yes
ac_cv_func_tmpfile=yes
ac_cv_func_tmpnam=yes
ac_cv_func_tmpnam_r=yes
ac_cv_func_truncate=yes
ac_cv_func_uname=yes
ac_cv_func_unlinkat=yes
ac_cv_func_unsetenv=yes
ac_cv_func_utimensat=yes
ac_cv_func_utimes=yes
ac_cv_func_wait3=yes
ac_cv_func_wait4=yes
ac_cv_func_waitid=yes
ac_cv_func_waitpid=yes
ac_cv_func_wcscoll=yes
ac_cv_func_wcsftime=yes
ac_cv_func_wcsxfrm=yes
ac_cv_func_wmemcmp=yes
ac_cv_func_writev=yes
ac_cv_has_le64toh=yes
ac_cv_has_makedev=yes
ac_cv_have_chflags=no
ac_cv_have_decl_dirfd=yes
ac_cv_have_decl_isfinite=yes
ac_cv_have_decl_isinf=yes
ac_cv_have_decl_isnan=yes
ac_cv_have_getc_unlocked=yes
ac_cv_have_lchflags=no
ac_cv_have_long_long_format=yes
ac_cv_have_size_t_format=yes
ac_cv_header_alloca_h=yes
ac_cv_header_asm_types_h=yes
ac_cv_header_bluetooth_bluetooth_h=no
ac_cv_header_bluetooth_h=no
ac_cv_header_conio_h=no
ac_cv_header_curses_h=yes
ac_cv_header_direct_h=no
ac_cv_header_dirent_dirent_h=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_endian_h=yes
ac_cv_header_errno_h=yes
ac_cv_header_fcntl_h=yes
ac_cv_header_grp_h=yes
ac_cv_header_ieeefp_h=no
ac_cv_header_inttypes_h=yes
ac_cv_header_io_h=no
ac_cv_header_langinfo_h=yes
ac_cv_header_libintl_h=yes
ac_cv_header_libutil_h=no
ac_cv_header_linux_can_bcm_h=no
ac_cv_header_linux_can_h=yes
ac_cv_header_linux_can_raw_h=yes
ac_cv_header_linux_netlink_h=yes
ac_cv_header_linux_tipc_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_minix_config_h=no
ac_cv_header_ncurses_h=yes
ac_cv_header_net_if_h=yes
ac_cv_header_netpacket_packet_h=yes
ac_cv_header_poll_h=yes
ac_cv_header_process_h=no
ac_cv_header_pthread_h=yes
ac_cv_header_pty_h=yes
ac_cv_header_sched_h=yes
ac_cv_header_shadow_h=yes
ac_cv_header_signal_h=yes
ac_cv_header_spawn_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_stropts_h=yes
ac_cv_header_sys_audioio_h=no
ac_cv_header_sys_bsdtty_h=no
ac_cv_header_sys_devpoll_h=no
ac_cv_header_sys_endian_h=no
ac_cv_header_sys_epoll_h=yes
ac_cv_header_sys_event_h=no
ac_cv_header_sys_file_h=yes
ac_cv_header_sys_ioctl_h=yes
ac_cv_header_sys_kern_control_h=no
ac_cv_header_sys_loadavg_h=no
ac_cv_header_sys_lock_h=no
ac_cv_header_sys_mkdev_h=no
ac_cv_header_sys_modem_h=no
ac_cv_header_sys_param_h=yes
ac_cv_header_sys_poll_h=yes
ac_cv_header_sys_resource_h=yes
ac_cv_header_sys_select_h=yes
ac_cv_header_sys_sendfile_h=yes
ac_cv_header_sys_socket_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_statvfs_h=yes
ac_cv_header_sys_sys_domain_h=no
ac_cv_header_sys_syscall_h=yes
ac_cv_header_sys_termio_h=no
ac_cv_header_sys_time_h=yes
ac_cv_header_sys_times_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_sys_types_h_makedev=yes
ac_cv_header_sys_uio_h=yes
ac_cv_header_sys_un_h=yes
ac_cv_header_sys_utsname_h=yes
ac_cv_header_sys_wait_h=yes
ac_cv_header_sys_xattr_h=yes
ac_cv_header_sysexits_h=yes
ac_cv_header_term_h=yes
ac_cv_header_termios_h=yes
ac_cv_header_time=yes
ac_cv_header_time_altzone=no
ac_cv_header_unistd_h=yes
ac_cv_header_util_h=no
ac_cv_header_utime_h=yes
ac_cv_header_wchar_h=yes
ac_cv_host=x86_64-unknown-linux-gnu
ac_cv_kpthread=no
ac_cv_kthread=no
ac_cv_lib_c_inet_aton=yes
ac_cv_lib_crypto_RAND_egd=yes
ac_cv_lib_dl_dlopen=yes
ac_cv_lib_dld_shl_load=no
ac_cv_lib_intl_textdomain=no
ac_cv_lib_nsl_t_open=no
ac_cv_lib_readline_append_history=yes
ac_cv_lib_readline_rl_callback_handler_install=yes
ac_cv_lib_readline_rl_completion_display_matches_hook=yes
ac_cv_lib_readline_rl_completion_matches=yes
ac_cv_lib_readline_rl_pre_input_hook=yes
ac_cv_lib_rt_clock_gettime=yes
ac_cv_lib_sendfile_sendfile=no
ac_cv_lib_socket_socket=no
ac_cv_lib_util_openpty=yes
ac_cv_lib_z_inflateCopy=yes
ac_cv_little_endian_double=yes
ac_cv_log1p_drops_zero_sign=no
ac_cv_member_struct_stat_st_birthtime=no
ac_cv_member_struct_stat_st_blksize=yes
ac_cv_member_struct_stat_st_blocks=yes
ac_cv_member_struct_stat_st_flags=no
ac_cv_member_struct_stat_st_gen=no
ac_cv_member_struct_stat_st_rdev=yes
ac_cv_member_struct_tm_tm_zone=yes
ac_cv_mixed_endian_double=no
ac_cv_mvwdelch_is_expression=yes
ac_cv_no_strict_aliasing=no
ac_cv_objext=o
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_GREP=/bin/grep
ac_cv_path_ac_pt_PKG_CONFIG=/exports/people/andersenlab/dec211/.linuxbrew/bin/pkg-config
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/bin/mkdir
ac_cv_posix_semaphores_enabled=yes
ac_cv_prog_CPP='/usr/bin/gcc-4.4 -E'
ac_cv_prog_PYTHON=python3
ac_cv_prog_TRUE=true
ac_cv_prog_ac_ct_AR=ar
ac_cv_prog_ac_ct_CC=/usr/bin/gcc-4.4
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_READELF=readelf
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_pthread=yes
ac_cv_pthread_is_default=no
ac_cv_pthread_system_supported=yes
ac_cv_rshift_extends_sign=yes
ac_cv_safe_to_define___extensions__=yes
ac_cv_search_opendir='none required'
ac_cv_search_sem_init=-lpthread
ac_cv_sizeof__Bool=1
ac_cv_sizeof_double=8
ac_cv_sizeof_float=4
ac_cv_sizeof_fpos_t=16
ac_cv_sizeof_int=4
ac_cv_sizeof_long=8
ac_cv_sizeof_long_double=16
ac_cv_sizeof_long_long=8
ac_cv_sizeof_off_t=8
ac_cv_sizeof_pid_t=4
ac_cv_sizeof_pthread_t=8
ac_cv_sizeof_short=2
ac_cv_sizeof_size_t=8
ac_cv_sizeof_time_t=8
ac_cv_sizeof_uintptr_t=8
ac_cv_sizeof_void_p=8
ac_cv_sizeof_wchar_t=4
ac_cv_stat_tv_nsec2=no
ac_cv_stat_tv_nsec=yes
ac_cv_struct_addrinfo=yes
ac_cv_struct_sockaddr_storage=yes
ac_cv_struct_tm=time.h
ac_cv_tanh_preserves_zero_sign=yes
ac_cv_type___uint128_t=yes
ac_cv_type_int32_t=yes
ac_cv_type_int64_t=yes
ac_cv_type_mode_t=yes
ac_cv_type_off_t=yes
ac_cv_type_pid_t=yes
ac_cv_type_size_t=yes
ac_cv_type_socklen_t=yes
ac_cv_type_ssize_t=yes
ac_cv_type_uid_t=yes
ac_cv_type_uint32_t=yes
ac_cv_type_uint64_t=yes
ac_cv_type_uintptr_t=yes
ac_cv_wchar_t_signed=yes
ac_cv_window_has_flags=yes
ac_cv_working_tzset=yes
ac_cv_x87_double_rounding=no
py_cv_lib_readline=yes

## ----------------- ##
## Output variables. ##
## ----------------- ##

ABIFLAGS='m'
AR='ar'
ARCH_RUN_32BIT=''
ARFLAGS='rc'
ASDLGEN='python3'
BASECFLAGS=' -Wno-unused-result -Wsign-compare -Wunreachable-code'
BASECPPFLAGS=''
BLDLIBRARY='-L. -lpython$(LDVERSION)'
BLDSHARED='$(CC) -shared'
BUILDEXEEXT=''
CC='/usr/bin/gcc-4.4 -pthread'
CCSHARED='-fPIC'
CFLAGS='-Os -w -pipe -march=core2'
CFLAGSFORSHARED='$(CCSHARED)'
CFLAGS_NODIST=' -Werror=declaration-after-statement'
CONFIGURE_MACOSX_DEPLOYMENT_TARGET=''
CONFIG_ARGS=' '\''--prefix=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0'\'' '\''--enable-ipv6'\'' '\''--datarootdir=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share'\'' '\''--datadir=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share'\'' '\''--enable-shared'\'' '\''--without-ensurepip'\'' '\''MACOSX_DEPLOYMENT_TARGET=0'\'' '\''CC=/usr/bin/gcc-4.4'\'' '\''CFLAGS=-Os -w -pipe -march=core2'\'' '\''LDFLAGS=-L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib'\'' '\''CPPFLAGS=-isystem/exports/people/andersenlab/dec211/.linuxbrew/include'\'' '\''PKG_CONFIG_LIBDIR=/exports/people/andersenlab/dec211/.linuxbrew/lib/pkgconfig'\'''
CPP='/usr/bin/gcc-4.4 -E'
CPPFLAGS='-isystem/exports/people/andersenlab/dec211/.linuxbrew/include'
CXX='/usr/bin/g++-4.4 -pthread'
DEFS='-DHAVE_CONFIG_H'
DLINCLDIR='.'
DLLLIBRARY=''
DYNLOADFILE='dynload_shlib.o'
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
ENSUREPIP='no'
EXEEXT=''
EXPORT_MACOSX_DEPLOYMENT_TARGET='#'
EXT_SUFFIX='.cpython-35m-x86_64-linux-gnu.so'
FRAMEWORKALTINSTALLFIRST=''
FRAMEWORKALTINSTALLLAST=''
FRAMEWORKINSTALLAPPSPREFIX=''
FRAMEWORKINSTALLFIRST=''
FRAMEWORKINSTALLLAST=''
FRAMEWORKPYTHONW=''
FRAMEWORKUNIXTOOLSPREFIX='/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0'
GNULD='yes'
GREP='/bin/grep'
HAS_HG='no-repository'
HAVE_GETHOSTBYNAME=''
HAVE_GETHOSTBYNAME_R=''
HAVE_GETHOSTBYNAME_R_3_ARG=''
HAVE_GETHOSTBYNAME_R_5_ARG=''
HAVE_GETHOSTBYNAME_R_6_ARG=''
HGBRANCH=''
HGTAG=''
HGVERSION=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTSONAME='libpython$(LDVERSION).so.1.0'
LDCXXSHARED='$(CXX) -shared'
LDFLAGS='-L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib'
LDLAST=''
LDLIBRARY='libpython$(LDVERSION).so'
LDLIBRARYDIR=''
LDSHARED='$(CC) -shared'
LDVERSION='$(VERSION)$(ABIFLAGS)'
LIBC=''
LIBFFI_INCLUDEDIR=''
LIBM='-lm'
LIBOBJS=''
LIBPL='$(prefix)/lib/python3.5/config-$(VERSION)$(ABIFLAGS)'
LIBRARY='libpython$(VERSION)$(ABIFLAGS).a'
LIBS='-lpthread -ldl  -lutil -lrt'
LIBTOOL_CRUFT=''
LINKCC='$(PURIFY) $(MAINCC)'
LINKFORSHARED='-Xlinker -export-dynamic'
LIPO_32BIT_FLAGS=''
LN='ln'
LTLIBOBJS=''
MACHDEP='linux'
MACHDEP_OBJS=''
MAINCC='$(CC)'
MKDIR_P='/bin/mkdir -p'
MULTIARCH=''
NO_AS_NEEDED='-Wl,--no-as-needed'
OBJEXT='o'
OPCODEHGEN='python3'
OPT='-DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes'
OTHER_LIBTOOL_OPT=''
PACKAGE_BUGREPORT='http://bugs.python.org/'
PACKAGE_NAME='python'
PACKAGE_STRING='python 3.5'
PACKAGE_TARNAME='python'
PACKAGE_URL=''
PACKAGE_VERSION='3.5'
PATH_SEPARATOR=':'
PKG_CONFIG='/exports/people/andersenlab/dec211/.linuxbrew/bin/pkg-config'
PKG_CONFIG_LIBDIR='/exports/people/andersenlab/dec211/.linuxbrew/lib/pkgconfig'
PKG_CONFIG_PATH=''
PLATDIR='plat-linux'
PLATFORM_TRIPLET='x86_64-linux-gnu'
PY3LIBRARY='libpython3.so'
PYTHON='python3'
PYTHONFRAMEWORK=''
PYTHONFRAMEWORKDIR='no-framework'
PYTHONFRAMEWORKIDENTIFIER='org.python.python'
PYTHONFRAMEWORKINSTALLDIR=''
PYTHONFRAMEWORKPREFIX=''
PYTHON_FOR_BUILD='./$(BUILDPYTHON) -E'
PY_ENABLE_SHARED='1'
RANLIB='ranlib'
READELF='readelf'
RUNSHARED='LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R'
SGI_ABI=''
SHELL='/bin/bash'
SHLIBS='$(LIBS)'
SHLIB_SUFFIX='.so'
SIGNAL_OBJS=''
SOABI='cpython-35m-x86_64-linux-gnu'
SOVERSION='1.0'
SRCDIRS='Parser Grammar Objects Python Modules Mac Programs'
TCLTK_INCLUDES=''
TCLTK_LIBS=''
THREADHEADERS=' $(srcdir)/Python/thread_foobar.h $(srcdir)/Python/thread_nt.h $(srcdir)/Python/thread_pthread.h'
THREADOBJ='Python/thread.o'
TRUE='true'
UNIVERSALSDK=''
UNIVERSAL_ARCH_FLAGS=''
USE_INLINE=''
USE_SIGNAL_MODULE=''
USE_THREAD_MODULE=''
VERSION='3.5'
_PYTHON_HOST_PLATFORM=''
ac_ct_AR='ar'
ac_ct_CC='/usr/bin/gcc-4.4'
ac_ct_CXX=''
ac_ct_READELF='readelf'
bindir='${exec_prefix}/bin'
build='x86_64-unknown-linux-gnu'
build_alias=''
build_cpu='x86_64'
build_os='linux-gnu'
build_vendor='unknown'
datadir='/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share'
datarootdir='/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='${prefix}'
host='x86_64-unknown-linux-gnu'
host_alias=''
host_cpu='x86_64'
host_os='linux-gnu'
host_vendor='unknown'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''

## ----------- ##
## confdefs.h. ##
## ----------- ##

/* confdefs.h */
#define _GNU_SOURCE 1
#define _NETBSD_SOURCE 1
#define __BSD_VISIBLE 1
#define _BSD_TYPES 1
#define _DARWIN_C_SOURCE 1
#define _XOPEN_SOURCE 700
#define _XOPEN_SOURCE_EXTENDED 1
#define _POSIX_C_SOURCE 200809L
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define __EXTENSIONS__ 1
#define _ALL_SOURCE 1
#define _GNU_SOURCE 1
#define _POSIX_PTHREAD_SEMANTICS 1
#define _TANDEM_SOURCE 1
#define USE_INLINE 1
#define Py_ENABLE_SHARED 1
#define STDC_HEADERS 1
#define HAVE_ASM_TYPES_H 1
#define HAVE_DLFCN_H 1
#define HAVE_ERRNO_H 1
#define HAVE_FCNTL_H 1
#define HAVE_GRP_H 1
#define HAVE_LANGINFO_H 1
#define HAVE_LIBINTL_H 1
#define HAVE_PTHREAD_H 1
#define HAVE_SCHED_H 1
#define HAVE_SHADOW_H 1
#define HAVE_SIGNAL_H 1
#define HAVE_STDINT_H 1
#define HAVE_STROPTS_H 1
#define HAVE_TERMIOS_H 1
#define HAVE_UNISTD_H 1
#define HAVE_UTIME_H 1
#define HAVE_POLL_H 1
#define HAVE_SYS_EPOLL_H 1
#define HAVE_SYS_POLL_H 1
#define HAVE_SYS_XATTR_H 1
#define HAVE_SYS_FILE_H 1
#define HAVE_SYS_IOCTL_H 1
#define HAVE_SYS_PARAM_H 1
#define HAVE_SYS_SELECT_H 1
#define HAVE_SYS_SENDFILE_H 1
#define HAVE_SYS_SOCKET_H 1
#define HAVE_SYS_STATVFS_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_SYS_SYSCALL_H 1
#define HAVE_SYS_TIME_H 1
#define HAVE_SYS_TIMES_H 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_UIO_H 1
#define HAVE_SYS_UN_H 1
#define HAVE_SYS_UTSNAME_H 1
#define HAVE_SYS_WAIT_H 1
#define HAVE_PTY_H 1
#define HAVE_SYS_RESOURCE_H 1
#define HAVE_NETPACKET_PACKET_H 1
#define HAVE_SYSEXITS_H 1
#define HAVE_LINUX_TIPC_H 1
#define HAVE_SPAWN_H 1
#define HAVE_ALLOCA_H 1
#define HAVE_ENDIAN_H 1
#define HAVE_DIRENT_H 1
#define HAVE_NET_IF_H 1
#define HAVE_LINUX_NETLINK_H 1
#define HAVE_LINUX_CAN_H 1
#define HAVE_LINUX_CAN_RAW_H 1
#define HAVE_MAKEDEV 1
#define HAVE_HTOLE64 1
#define _LARGEFILE_SOURCE 1
#define _FILE_OFFSET_BITS 64
#if defined(SCO_DS)
#undef _OFF_T
#endif
#define RETSIGTYPE void
#define HAVE_UINT32_T 1
#define HAVE_UINT64_T 1
#define HAVE_INT32_T 1
#define HAVE_INT64_T 1
#define HAVE_SSIZE_T 1
#define HAVE_GCC_UINT128_T 1
#define SIZEOF_INT 4
#define SIZEOF_LONG 8
#define SIZEOF_VOID_P 8
#define SIZEOF_SHORT 2
#define SIZEOF_FLOAT 4
#define SIZEOF_DOUBLE 8
#define SIZEOF_FPOS_T 16
#define SIZEOF_SIZE_T 8
#define SIZEOF_PID_T 4
#define HAVE_LONG_LONG 1
#define SIZEOF_LONG_LONG 8
#define HAVE_LONG_DOUBLE 1
#define SIZEOF_LONG_DOUBLE 16
#define HAVE_C99_BOOL 1
#define SIZEOF__BOOL 1
#define HAVE_UINTPTR_T 1
#define SIZEOF_UINTPTR_T 8
#define SIZEOF_OFF_T 8
#define SIZEOF_TIME_T 8
#define SIZEOF_PTHREAD_T 8
#define HAVE_LIBDL 1
#define HAVE_RAND_EGD 1
#define WITH_THREAD 1
#define PTHREAD_SYSTEM_SCHED_SUPPORTED 1
#define HAVE_PTHREAD_SIGMASK 1
#define HAVE_PTHREAD_ATFORK 1
#define ENABLE_IPV6 1
#define WITH_DOC_STRINGS 1
#define WITH_PYMALLOC 1
#define HAVE_DLOPEN 1
#define HAVE_DYNAMIC_LOADING 1
#define HAVE_ALARM 1
#define HAVE_ACCEPT4 1
#define HAVE_SETITIMER 1
#define HAVE_GETITIMER 1
#define HAVE_BIND_TEXTDOMAIN_CODESET 1
#define HAVE_CHOWN 1
#define HAVE_CLOCK 1
#define HAVE_CONFSTR 1
#define HAVE_CTERMID 1
#define HAVE_DUP3 1
#define HAVE_EXECV 1
#define HAVE_FACCESSAT 1
#define HAVE_FCHMOD 1
#define HAVE_FCHMODAT 1
#define HAVE_FCHOWN 1
#define HAVE_FCHOWNAT 1
#define HAVE_FEXECVE 1
#define HAVE_FDOPENDIR 1
#define HAVE_FORK 1
#define HAVE_FPATHCONF 1
#define HAVE_FSTATAT 1
#define HAVE_FTIME 1
#define HAVE_FTRUNCATE 1
#define HAVE_FUTIMESAT 1
#define HAVE_FUTIMENS 1
#define HAVE_FUTIMES 1
#define HAVE_GAI_STRERROR 1
#define HAVE_GETGROUPLIST 1
#define HAVE_GETGROUPS 1
#define HAVE_GETLOGIN 1
#define HAVE_GETLOADAVG 1
#define HAVE_GETPEERNAME 1
#define HAVE_GETPGID 1
#define HAVE_GETPID 1
#define HAVE_GETPRIORITY 1
#define HAVE_GETRESUID 1
#define HAVE_GETRESGID 1
#define HAVE_GETPWENT 1
#define HAVE_GETSPNAM 1
#define HAVE_GETSPENT 1
#define HAVE_GETSID 1
#define HAVE_GETWD 1
#define HAVE_IF_NAMEINDEX 1
#define HAVE_INITGROUPS 1
#define HAVE_KILL 1
#define HAVE_KILLPG 1
#define HAVE_LCHOWN 1
#define HAVE_LOCKF 1
#define HAVE_LINKAT 1
#define HAVE_LSTAT 1
#define HAVE_LUTIMES 1
#define HAVE_MMAP 1
#define HAVE_MEMRCHR 1
#define HAVE_MBRTOWC 1
#define HAVE_MKDIRAT 1
#define HAVE_MKFIFO 1
#define HAVE_MKFIFOAT 1
#define HAVE_MKNOD 1
#define HAVE_MKNODAT 1
#define HAVE_MKTIME 1
#define HAVE_MREMAP 1
#define HAVE_NICE 1
#define HAVE_OPENAT 1
#define HAVE_PATHCONF 1
#define HAVE_PAUSE 1
#define HAVE_PIPE2 1
#define HAVE_POLL 1
#define HAVE_POSIX_FALLOCATE 1
#define HAVE_POSIX_FADVISE 1
#define HAVE_PREAD 1
#define HAVE_PTHREAD_KILL 1
#define HAVE_PUTENV 1
#define HAVE_PWRITE 1
#define HAVE_READLINK 1
#define HAVE_READLINKAT 1
#define HAVE_READV 1
#define HAVE_REALPATH 1
#define HAVE_RENAMEAT 1
#define HAVE_SELECT 1
#define HAVE_SEM_OPEN 1
#define HAVE_SEM_TIMEDWAIT 1
#define HAVE_SEM_GETVALUE 1
#define HAVE_SEM_UNLINK 1
#define HAVE_SENDFILE 1
#define HAVE_SETEGID 1
#define HAVE_SETEUID 1
#define HAVE_SETGID 1
#define HAVE_SETHOSTNAME 1
#define HAVE_SETLOCALE 1
#define HAVE_SETREGID 1
#define HAVE_SETREUID 1
#define HAVE_SETRESUID 1
#define HAVE_SETRESGID 1
#define HAVE_SETSID 1
#define HAVE_SETPGID 1
#define HAVE_SETPGRP 1
#define HAVE_SETPRIORITY 1
#define HAVE_SETUID 1
#define HAVE_SETVBUF 1
#define HAVE_SCHED_GET_PRIORITY_MAX 1
#define HAVE_SCHED_SETAFFINITY 1
#define HAVE_SCHED_SETSCHEDULER 1
#define HAVE_SCHED_SETPARAM 1
#define HAVE_SCHED_RR_GET_INTERVAL 1
#define HAVE_SIGACTION 1
#define HAVE_SIGALTSTACK 1
#define HAVE_SIGINTERRUPT 1
#define HAVE_SIGPENDING 1
#define HAVE_SIGRELSE 1
#define HAVE_SIGTIMEDWAIT 1
#define HAVE_SIGWAIT 1
#define HAVE_SIGWAITINFO 1
#define HAVE_SNPRINTF 1
#define HAVE_STRFTIME 1
#define HAVE_SYMLINKAT 1
#define HAVE_SYNC 1
#define HAVE_SYSCONF 1
#define HAVE_TCGETPGRP 1
#define HAVE_TCSETPGRP 1
#define HAVE_TEMPNAM 1
#define HAVE_TIMEGM 1
#define HAVE_TIMES 1
#define HAVE_TMPFILE 1
#define HAVE_TMPNAM 1
#define HAVE_TMPNAM_R 1
#define HAVE_TRUNCATE 1
#define HAVE_UNAME 1
#define HAVE_UNLINKAT 1
#define HAVE_UNSETENV 1
#define HAVE_UTIMENSAT 1
#define HAVE_UTIMES 1
#define HAVE_WAITID 1
#define HAVE_WAITPID 1
#define HAVE_WAIT3 1
#define HAVE_WAIT4 1
#define HAVE_WCSCOLL 1
#define HAVE_WCSFTIME 1
#define HAVE_WCSXFRM 1
#define HAVE_WMEMCMP 1
#define HAVE_WRITEV 1
#define HAVE_DIRFD 1
#define HAVE_CHROOT 1
#define HAVE_LINK 1
#define HAVE_SYMLINK 1
#define HAVE_FCHDIR 1
#define HAVE_FSYNC 1
#define HAVE_FDATASYNC 1
#define HAVE_EPOLL 1
#define HAVE_EPOLL_CREATE1 1
#define HAVE_FLOCK 1
#define HAVE_GETPAGESIZE 1
#define HAVE_ZLIB_COPY 1
#define HAVE_HSTRERROR 1
#define HAVE_INET_ATON 1
#define HAVE_INET_PTON 1
#define HAVE_SETGROUPS 1
#define HAVE_OPENPTY 1
#define HAVE_FORKPTY 1
#define HAVE_MEMMOVE 1
#define HAVE_FSEEKO 1
#define HAVE_FSTATVFS 1
#define HAVE_FTELLO 1
#define HAVE_STATVFS 1
#define HAVE_DUP2 1
#define HAVE_STRDUP 1
#define HAVE_GETPGRP 1
#define HAVE_SETPGRP 1
#define HAVE_GETTIMEOFDAY 1
#define HAVE_CLOCK_GETTIME 1
#define TIMEMODULE_LIB rt
#define HAVE_CLOCK_GETRES 1
#define HAVE_DEVICE_MACROS 1
#define HAVE_GETADDRINFO 1
#define HAVE_GETNAMEINFO 1
#define TIME_WITH_SYS_TIME 1
#define HAVE_STRUCT_TM_TM_ZONE 1
#define HAVE_TM_ZONE 1
#define HAVE_STRUCT_STAT_ST_RDEV 1
#define HAVE_STRUCT_STAT_ST_BLKSIZE 1
#define HAVE_STRUCT_STAT_ST_BLOCKS 1
#define HAVE_ST_BLOCKS 1
#define SYS_SELECT_WITH_SYS_TIME 1
#define HAVE_ADDRINFO 1
#define HAVE_SOCKADDR_STORAGE 1
#define HAVE_PROTOTYPES 1
#define HAVE_STDARG_PROTOTYPES 1
#define HAVE_SOCKETPAIR 1
#define VA_LIST_IS_ARRAY 1
#define HAVE_GETHOSTBYNAME_R 1
#define HAVE_GETHOSTBYNAME_R 1
#define HAVE_GETHOSTBYNAME_R_6_ARG 1
#define HAVE_GCC_ASM_FOR_X64 1
#define DOUBLE_IS_LITTLE_ENDIAN_IEEE754 1
#define HAVE_GCC_ASM_FOR_X87 1
#define HAVE_ACOSH 1
#define HAVE_ASINH 1
#define HAVE_ATANH 1
#define HAVE_COPYSIGN 1
#define HAVE_ERF 1
#define HAVE_ERFC 1
#define HAVE_EXPM1 1
#define HAVE_FINITE 1
#define HAVE_GAMMA 1
#define HAVE_HYPOT 1
#define HAVE_LGAMMA 1
#define HAVE_LOG1P 1
#define HAVE_LOG2 1
#define HAVE_ROUND 1
#define HAVE_TGAMMA 1
#define HAVE_DECL_ISINF 1
#define HAVE_DECL_ISNAN 1
#define HAVE_DECL_ISFINITE 1
#define TANH_PRESERVES_ZERO_SIGN 1
#define HAVE_WCHAR_H 1
#define SIZEOF_WCHAR_T 4
#define HAVE_GETC_UNLOCKED 1
#define HAVE_LIBREADLINE 1
#define HAVE_RL_CALLBACK 1
#define HAVE_RL_COMPLETION_APPEND_CHARACTER 1
#define HAVE_RL_COMPLETION_SUPPRESS_APPEND 1
#define HAVE_RL_PRE_INPUT_HOOK 1
#define HAVE_RL_COMPLETION_DISPLAY_MATCHES_HOOK 1
#define HAVE_RL_COMPLETION_MATCHES 1
#define HAVE_RL_CATCH_SIGNAL 1
#define HAVE_RL_APPEND_HISTORY 1
#define HAVE_STRUCT_TM_TM_ZONE 1
#define HAVE_TM_ZONE 1
#define HAVE_WORKING_TZSET 1
#define HAVE_STAT_TV_NSEC 1
#define HAVE_CURSES_H 1
#define HAVE_NCURSES_H 1
#define HAVE_TERM_H 1
#define MVWDELCH_IS_EXPRESSION 1
#define WINDOW_HAS_FLAGS 1
#define HAVE_CURSES_IS_TERM_RESIZED 1
#define HAVE_CURSES_RESIZE_TERM 1
#define HAVE_CURSES_RESIZETERM 1
#define HAVE_DEV_PTMX 1
#define PY_FORMAT_LONG_LONG "ll"
#define PY_FORMAT_SIZE_T "z"
#define HAVE_COMPUTED_GOTOS 1
#define HAVE_DIRENT_D_TYPE 1

configure: exit 0

Sat Sep 26 17:12:09 -0500 2015

make
install
PYTHONAPPSDIR=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0

Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib
if test "no-framework" = "no-framework" ; then \
		/usr/bin/install -c python /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3.5m; \
	else \
		/usr/bin/install -c -s Mac/pythonw /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3.5m; \
	fi
if test "3.5" != "3.5m"; then \
		if test -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3.5 -o -h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3.5; \
		then rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3.5; \
		fi; \
		(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin; ln python3.5m python3.5); \
	fi
if test -f libpython3.5m.so && test "no-framework" = "no-framework" ; then \
		if test -n "" ; then \
			/usr/bin/install -c -m 555  /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin; \
		else \
			/usr/bin/install -c -m 555 libpython3.5m.so /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/libpython3.5m.so.1.0; \
			if test libpython3.5m.so != libpython3.5m.so.1.0; then \
				(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib; ln -sf libpython3.5m.so.1.0 libpython3.5m.so) \
			fi \
		fi; \
		if test -n "libpython3.so"; then \
			/usr/bin/install -c -m 555 libpython3.so /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/libpython3.so; \
		fi; \
	else	true; \
	fi
if test "x" != "x" ; then \
		rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/binpython3.5-32; \
		lipo  \
			-output /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3.5-32 \
			/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3.5; \
	fi
running build
running build_ext
ldd: /exports/people/andersenlab/dec211/.linuxbrew/opt/readline/lib/libhistory.dylib: No such file or directory
INFO: Can't locate Tcl/Tk libs and/or headers
building '_ssl' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ssl.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ssl.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ssl.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lssl -lcrypto -lpython3.5m -o build/lib.linux-x86_64-3.5/_ssl.cpython-35m-x86_64-linux-gnu.so
building '_gdbm' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.o
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:12:18: error: gdbm.h: No such file or directory
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:40: error: expected specifier-qualifier-list before ‘GDBM_FILE’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘newdbmobject’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:76: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:80: error: ‘gdbm_errno’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:80: error: (Each undeclared identifier is reported only once
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:80: error: for each function it appears in.)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_dealloc’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:92: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:93: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_length’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:100: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:105: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:105: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:107: error: ‘okey’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:111: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:111: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:112: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_subscript’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:126: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:126: error: expected ‘;’ before ‘drec’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:128: error: ‘krec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:131: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:136: error: ‘drec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:136: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_ass_sub’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:174: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:174: error: expected ‘;’ before ‘krec’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:176: error: ‘krec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:181: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:188: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:194: error: ‘drec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:200: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:200: error: ‘GDBM_REPLACE’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:205: error: ‘gdbm_errno’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_close_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:255: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:256: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:257: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_keys_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:274: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:274: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:281: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:287: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:287: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:302: error: ‘nextkey’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:302: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_contains’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:313: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:313: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:316: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:322: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:337: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_firstkey_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:368: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:368: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:370: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:371: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:371: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_nextkey_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:406: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:406: error: expected ‘;’ before ‘dbm_key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:408: error: ‘dbm_key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:410: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:411: error: ‘nextkey’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:411: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_reorganize_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:439: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:441: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:445: error: ‘gdbm_errno’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_sync_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:465: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:466: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbmopen_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:573: error: ‘GDBM_READER’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:576: error: ‘GDBM_WRITER’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:579: error: ‘GDBM_WRCREAT’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:582: error: ‘GDBM_NEWDB’ undeclared (first use in this function)
*** WARNING: renaming "_ssl" since importing it failed: build/lib.linux-x86_64-3.5/_ssl.cpython-35m-x86_64-linux-gnu.so: undefined symbol: SSLv2_method

Python build finished successfully!
The necessary bits to build these optional modules were not found:
_dbm                  _sqlite3              _tkinter           
To find the necessary bits, look in setup.py in detect_modules() for the module's name.


Failed to build these modules:
_gdbm                                                          


Following modules built successfully but were removed because they could not be imported:
_ssl                                                           

running build_scripts
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/pydoc3 -> build/scripts-3.5
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/idle3 -> build/scripts-3.5
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/2to3 -> build/scripts-3.5
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/pyvenv -> build/scripts-3.5
changing mode of build/scripts-3.5/pydoc3 from 644 to 755
changing mode of build/scripts-3.5/idle3 from 644 to 755
changing mode of build/scripts-3.5/2to3 from 644 to 755
changing mode of build/scripts-3.5/pyvenv from 644 to 755
renaming build/scripts-3.5/pydoc3 to build/scripts-3.5/pydoc3.5
renaming build/scripts-3.5/idle3 to build/scripts-3.5/idle3.5
renaming build/scripts-3.5/2to3 to build/scripts-3.5/2to3-3.5
renaming build/scripts-3.5/pyvenv to build/scripts-3.5/pyvenv-3.5
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/tkinter
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/tkinter/test
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/tkinter/test/test_tkinter
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/tkinter/test/test_ttk
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/site-packages
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/test
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/usr/bin/install -c -m 644 ./Lib/test/test_importlib/source/__init__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/test/test_importlib/source
/usr/bin/install -c -m 644 ./Lib/test/test_importlib/source/__main__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/test/test_importlib/source
/usr/bin/install -c -m 644 ./Lib/test/test_importlib/source/test_case_sensitivity.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/test/test_importlib/source
/usr/bin/install -c -m 644 ./Lib/test/test_importlib/source/test_file_loader.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/test/test_importlib/source
/usr/bin/install -c -m 644 ./Lib/test/test_importlib/source/test_finder.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/test/test_importlib/source
/usr/bin/install -c -m 644 ./Lib/test/test_importlib/source/test_path_hook.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/test/test_importlib/source
/usr/bin/install -c -m 644 ./Lib/test/test_importlib/source/test_source_encoding.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/test/test_importlib/source
/usr/bin/install -c -m 644 ./Lib/turtledemo/__init__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c -m 644 ./Lib/turtledemo/__main__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/bytedesign.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c -m 644 ./Lib/turtledemo/chaos.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/clock.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c -m 644 ./Lib/turtledemo/colormixer.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/forest.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/fractalcurves.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/lindenmayer.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/minimal_hanoi.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c -m 644 ./Lib/turtledemo/nim.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/paint.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/peace.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/penrose.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/planet_and_moon.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c -m 644 ./Lib/turtledemo/round_dance.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c -m 644 ./Lib/turtledemo/sorting_animate.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/tree.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c -m 644 ./Lib/turtledemo/turtle.cfg /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/two_canvases.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c -m 644 ./Lib/turtledemo/wikipedia.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c ./Lib/turtledemo/yinyang.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/turtledemo
/usr/bin/install -c -m 644 ./Lib/multiprocessing/__init__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/connection.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/context.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/forkserver.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/heap.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/managers.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/pool.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/popen_fork.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/popen_forkserver.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/popen_spawn_posix.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/popen_spawn_win32.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/process.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/queues.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/reduction.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/resource_sharer.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/semaphore_tracker.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/sharedctypes.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/spawn.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/synchronize.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/util.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing
/usr/bin/install -c -m 644 ./Lib/multiprocessing/dummy/__init__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing/dummy
/usr/bin/install -c -m 644 ./Lib/multiprocessing/dummy/connection.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/multiprocessing/dummy
/usr/bin/install -c -m 644 ./Lib/unittest/__init__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest
/usr/bin/install -c -m 644 ./Lib/unittest/__main__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest
/usr/bin/install -c -m 644 ./Lib/unittest/case.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest
/usr/bin/install -c -m 644 ./Lib/unittest/loader.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest
/usr/bin/install -c -m 644 ./Lib/unittest/main.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest
/usr/bin/install -c -m 644 ./Lib/unittest/mock.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest
/usr/bin/install -c -m 644 ./Lib/unittest/result.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest
/usr/bin/install -c -m 644 ./Lib/unittest/runner.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest
/usr/bin/install -c -m 644 ./Lib/unittest/signals.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest
/usr/bin/install -c -m 644 ./Lib/unittest/suite.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest
/usr/bin/install -c -m 644 ./Lib/unittest/util.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest
/usr/bin/install -c -m 644 ./Lib/unittest/test/__init__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/__main__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/_test_warnings.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/dummy.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/support.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_assertions.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_break.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_case.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_discovery.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_functiontestcase.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_loader.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_program.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_result.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_runner.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_setups.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_skipping.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/test_suite.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test
/usr/bin/install -c -m 644 ./Lib/unittest/test/testmock/__init__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test/testmock
/usr/bin/install -c -m 644 ./Lib/unittest/test/testmock/__main__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test/testmock
/usr/bin/install -c -m 644 ./Lib/unittest/test/testmock/support.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test/testmock
/usr/bin/install -c -m 644 ./Lib/unittest/test/testmock/testcallable.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test/testmock
/usr/bin/install -c -m 644 ./Lib/unittest/test/testmock/testhelpers.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test/testmock
/usr/bin/install -c -m 644 ./Lib/unittest/test/testmock/testmagicmethods.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test/testmock
/usr/bin/install -c -m 644 ./Lib/unittest/test/testmock/testmock.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test/testmock
/usr/bin/install -c -m 644 ./Lib/unittest/test/testmock/testpatch.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test/testmock
/usr/bin/install -c -m 644 ./Lib/unittest/test/testmock/testsentinel.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test/testmock
/usr/bin/install -c -m 644 ./Lib/unittest/test/testmock/testwith.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/unittest/test/testmock
/usr/bin/install -c -m 644 ./Lib/venv/__init__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/venv
/usr/bin/install -c -m 644 ./Lib/venv/__main__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/venv
/usr/bin/install -c -m 644 ./Lib/venv/scripts/posix/activate /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/venv/scripts/posix
/usr/bin/install -c -m 644 ./Lib/venv/scripts/posix/activate.csh /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/venv/scripts/posix
/usr/bin/install -c -m 644 ./Lib/venv/scripts/posix/activate.fish /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/venv/scripts/posix
/usr/bin/install -c -m 644 ./Lib/curses/__init__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/curses
/usr/bin/install -c -m 644 ./Lib/curses/ascii.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/curses
/usr/bin/install -c -m 644 ./Lib/curses/has_key.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/curses
/usr/bin/install -c -m 644 ./Lib/curses/panel.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/curses
/usr/bin/install -c -m 644 ./Lib/curses/textpad.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/curses
/usr/bin/install -c -m 644 ./Lib/pydoc_data/__init__.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/pydoc_data
/usr/bin/install -c -m 644 ./Lib/pydoc_data/_pydoc.css /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/pydoc_data
/usr/bin/install -c -m 644 ./Lib/pydoc_data/topics.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/pydoc_data
/usr/bin/install -c -m 644 ./Lib/plat-linux/CDROM.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/plat-linux
/usr/bin/install -c -m 644 ./Lib/plat-linux/DLFCN.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/plat-linux
/usr/bin/install -c -m 644 ./Lib/plat-linux/IN.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/plat-linux
/usr/bin/install -c -m 644 ./Lib/plat-linux/TYPES.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/plat-linux
/usr/bin/install -c ./Lib/plat-linux/regen /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/plat-linux
/usr/bin/install -c -m 644 ./LICENSE /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/LICENSE.txt
if test -d /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/distutils/tests; then \
		/usr/bin/install -c -m 644 ./Modules/xxmodule.c \
			/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/distutils/tests ; \
	fi
PYTHONPATH=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5  LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R \
		./python -E -Wi /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/compileall.py \
		-d /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5 -f \
		-x 'bad_coding|badsyntax|site-packages|lib2to3/tests/data' \
		/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5
Segmentation fault
make: [libinstall] Error 139 (ignored)
PYTHONPATH=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5 LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R \
		./python -E -Wi -O /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/compileall.py \
		-d /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5 -f \
		-x 'bad_coding|badsyntax|site-packages|lib2to3/tests/data' \
		/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5
Segmentation fault
make: [libinstall] Error 139 (ignored)
PYTHONPATH=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5 LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R \
		./python -E -Wi -OO /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/compileall.py \
		-d /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5 -f \
		-x 'bad_coding|badsyntax|site-packages|lib2to3/tests/data' \
		/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5
Segmentation fault
make: [libinstall] Error 139 (ignored)
PYTHONPATH=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5 LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R \
		./python -E -Wi /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/compileall.py \
		-d /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/site-packages -f \
		-x badsyntax /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/site-packages
Segmentation fault
make: [libinstall] Error 139 (ignored)
PYTHONPATH=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5 LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R \
		./python -E -Wi -O /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/compileall.py \
		-d /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/site-packages -f \
		-x badsyntax /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/site-packages
Segmentation fault
make: [libinstall] Error 139 (ignored)
PYTHONPATH=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5 LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R \
		./python -E -Wi -OO /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/compileall.py \
		-d /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/site-packages -f \
		-x badsyntax /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/site-packages
Segmentation fault
make: [libinstall] Error 139 (ignored)
PYTHONPATH=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5 LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R \
		./python -E -m lib2to3.pgen2.driver /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib2to3/Grammar.txt
Generating grammar tables from /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib2to3/Grammar.txt
Writing grammar tables to /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib2to3/Grammar3.5.0.final.0.pickle
PYTHONPATH=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5 LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R \
		./python -E -m lib2to3.pgen2.driver /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib2to3/PatternGrammar.txt
Generating grammar tables from /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib2to3/PatternGrammar.txt
Writing grammar tables to /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib2to3/PatternGrammar3.5.0.final.0.pickle
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/Python-ast.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/Python.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/abstract.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/accu.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/asdl.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/ast.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/bitset.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/bltinmodule.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/boolobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/bytearrayobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/bytes_methods.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/bytesobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/cellobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/ceval.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/classobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/code.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/codecs.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/compile.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/complexobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/datetime.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/descrobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/dictobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/dtoa.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/dynamic_annotations.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/enumobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/errcode.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/eval.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/fileobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/fileutils.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/floatobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/frameobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/funcobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/genobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/graminit.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/grammar.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/import.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/intrcheck.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/iterobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/listobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/longintrepr.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/longobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/marshal.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/memoryobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/metagrammar.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/methodobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/modsupport.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/moduleobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/namespaceobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/node.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/object.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/objimpl.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/odictobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/opcode.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/osdefs.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/parsetok.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/patchlevel.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pgen.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pgenheaders.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/py_curses.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pyarena.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pyatomic.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pycapsule.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pyctype.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pydebug.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pyerrors.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pyexpat.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pyfpe.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pygetopt.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pyhash.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pylifecycle.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pymacconfig.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pymacro.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pymath.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pymem.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pyport.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pystate.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pystrcmp.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pystrhex.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pystrtod.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pythonrun.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pythread.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/pytime.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/rangeobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/setobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/sliceobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/structmember.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/structseq.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/symtable.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/sysmodule.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/token.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/traceback.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/tupleobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/typeslots.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/ucnhash.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/unicodeobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/warnings.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 ./Include/weakrefobject.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m
/usr/bin/install -c -m 644 pyconfig.h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include/python3.5m/pyconfig.h
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/config-3.5m
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/pkgconfig
/usr/bin/install -c -m 644 Modules/config.c /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/config-3.5m/config.c
/usr/bin/install -c -m 644 Programs/python.o /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/config-3.5m/python.o
/usr/bin/install -c -m 644 ./Modules/config.c.in /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/config-3.5m/config.c.in
/usr/bin/install -c -m 644 Makefile /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/config-3.5m/Makefile
/usr/bin/install -c -m 644 Modules/Setup /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/config-3.5m/Setup
/usr/bin/install -c -m 644 Modules/Setup.local /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/config-3.5m/Setup.local
/usr/bin/install -c -m 644 Modules/Setup.config /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/config-3.5m/Setup.config
/usr/bin/install -c -m 644 Misc/python.pc /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/pkgconfig/python-3.5.pc
/usr/bin/install -c ./Modules/makesetup /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/config-3.5m/makesetup
/usr/bin/install -c ./install-sh /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/config-3.5m/install-sh
/usr/bin/install -c python-config.py /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/config-3.5m/python-config.py
/usr/bin/install -c python-config /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3.5m-config
LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R ./python -E ./setup.py install \
	   	--prefix=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0 \
		--install-scripts=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin \
		--install-platlib=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload \
		--root=/
running install
running build
running build_ext
ldd: /exports/people/andersenlab/dec211/.linuxbrew/opt/readline/lib/libhistory.dylib: No such file or directory
INFO: Can't locate Tcl/Tk libs and/or headers
building '_ssl' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ssl.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ssl.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ssl.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lssl -lcrypto -lpython3.5m -o build/lib.linux-x86_64-3.5/_ssl.cpython-35m-x86_64-linux-gnu.so
building '_gdbm' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.o
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:12:18: error: gdbm.h: No such file or directory
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:40: error: expected specifier-qualifier-list before ‘GDBM_FILE’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘newdbmobject’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:76: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:80: error: ‘gdbm_errno’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:80: error: (Each undeclared identifier is reported only once
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:80: error: for each function it appears in.)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_dealloc’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:92: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:93: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_length’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:100: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:105: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:105: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:107: error: ‘okey’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:111: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:111: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:112: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_subscript’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:126: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:126: error: expected ‘;’ before ‘drec’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:128: error: ‘krec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:131: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:136: error: ‘drec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:136: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_ass_sub’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:174: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:174: error: expected ‘;’ before ‘krec’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:176: error: ‘krec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:181: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:188: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:194: error: ‘drec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:200: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:200: error: ‘GDBM_REPLACE’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:205: error: ‘gdbm_errno’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_close_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:255: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:256: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:257: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_keys_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:274: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:274: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:281: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:287: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:287: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:302: error: ‘nextkey’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:302: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_contains’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:313: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:313: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:316: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:322: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:337: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_firstkey_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:368: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:368: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:370: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:371: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:371: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_nextkey_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:406: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:406: error: expected ‘;’ before ‘dbm_key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:408: error: ‘dbm_key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:410: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:411: error: ‘nextkey’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:411: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_reorganize_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:439: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:441: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:445: error: ‘gdbm_errno’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_sync_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:465: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:466: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbmopen_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:573: error: ‘GDBM_READER’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:576: error: ‘GDBM_WRITER’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:579: error: ‘GDBM_WRCREAT’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:582: error: ‘GDBM_NEWDB’ undeclared (first use in this function)
*** WARNING: renaming "_ssl" since importing it failed: build/lib.linux-x86_64-3.5/_ssl.cpython-35m-x86_64-linux-gnu.so: undefined symbol: SSLv2_method

Python build finished successfully!
The necessary bits to build these optional modules were not found:
_dbm                  _sqlite3              _tkinter           
To find the necessary bits, look in setup.py in detect_modules() for the module's name.


Failed to build these modules:
_gdbm                                                          


Following modules built successfully but were removed because they could not be imported:
_ssl                                                           

running build_scripts
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/pydoc3 -> build/scripts-3.5
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/idle3 -> build/scripts-3.5
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/2to3 -> build/scripts-3.5
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/pyvenv -> build/scripts-3.5
changing mode of build/scripts-3.5/pydoc3 from 644 to 755
changing mode of build/scripts-3.5/idle3 from 644 to 755
changing mode of build/scripts-3.5/2to3 from 644 to 755
changing mode of build/scripts-3.5/pyvenv from 644 to 755
renaming build/scripts-3.5/pydoc3 to build/scripts-3.5/pydoc3.5
renaming build/scripts-3.5/idle3 to build/scripts-3.5/idle3.5
renaming build/scripts-3.5/2to3 to build/scripts-3.5/2to3-3.5
renaming build/scripts-3.5/pyvenv to build/scripts-3.5/pyvenv-3.5
running install_lib
creating /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_curses_panel.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/xxlimited.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/audioop.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/nis.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_codecs_kr.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_codecs_iso2022.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_sha1.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_testcapi.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_codecs_cn.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_ctypes.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/select.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_sysconfigdata.py -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_posixsubprocess.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_md5.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_lsprof.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/unicodedata.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_opcode.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_codecs_tw.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_bz2.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_json.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_pickle.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/syslog.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_hashlib.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_elementtree.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_testbuffer.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_crypt.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/zlib.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_ssl.cpython-35m-x86_64-linux-gnu_failed.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_bisect.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/ossaudiodev.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_sha512.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_curses.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_decimal.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_multiprocessing.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_heapq.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/cmath.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_struct.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/fcntl.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/termios.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_testimportmultiple.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_ctypes_test.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/pyexpat.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_codecs_jp.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_socket.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/binascii.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_sha256.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/readline.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/array.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/math.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/resource.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
creating /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/__pycache__
copying build/lib.linux-x86_64-3.5/__pycache__/_sysconfigdata.cpython-35.opt-1.pyc -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/__pycache__
copying build/lib.linux-x86_64-3.5/__pycache__/_sysconfigdata.cpython-35.opt-2.pyc -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/__pycache__
copying build/lib.linux-x86_64-3.5/__pycache__/_sysconfigdata.cpython-35.pyc -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/__pycache__
copying build/lib.linux-x86_64-3.5/mmap.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/grp.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_multibytecodec.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_csv.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_random.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_testmultiphase.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_codecs_hk.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_datetime.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/spwd.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/parser.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
copying build/lib.linux-x86_64-3.5/_lzma.cpython-35m-x86_64-linux-gnu.so -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_curses_panel.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/xxlimited.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/audioop.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/nis.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_codecs_kr.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_codecs_iso2022.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_sha1.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_testcapi.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_codecs_cn.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_ctypes.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/select.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_sysconfigdata.py to 644
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_posixsubprocess.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_md5.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_lsprof.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/unicodedata.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_opcode.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_codecs_tw.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_bz2.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_json.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_pickle.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/syslog.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_hashlib.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_elementtree.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_testbuffer.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_crypt.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/zlib.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_ssl.cpython-35m-x86_64-linux-gnu_failed.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_bisect.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/ossaudiodev.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_sha512.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_curses.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_decimal.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_multiprocessing.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_heapq.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/cmath.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_struct.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/fcntl.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/termios.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_testimportmultiple.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_ctypes_test.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/pyexpat.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_codecs_jp.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_socket.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/binascii.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_sha256.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/readline.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/array.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/math.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/resource.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/__pycache__/_sysconfigdata.cpython-35.opt-1.pyc to 644
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/__pycache__/_sysconfigdata.cpython-35.opt-2.pyc to 644
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/__pycache__/_sysconfigdata.cpython-35.pyc to 644
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/mmap.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/grp.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_multibytecodec.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_csv.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_random.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_testmultiphase.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_codecs_hk.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_datetime.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/spwd.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/parser.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_lzma.cpython-35m-x86_64-linux-gnu.so to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/ to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/__pycache__ to 755
running install_scripts
copying build/scripts-3.5/2to3-3.5 -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin
copying build/scripts-3.5/idle3.5 -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin
copying build/scripts-3.5/pydoc3.5 -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin
copying build/scripts-3.5/pyvenv-3.5 -> /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/2to3-3.5 to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/idle3.5 to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/pydoc3.5 to 755
changing mode of /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/pyvenv-3.5 to 755
rm /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/_sysconfigdata.py
rm -r /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/python3.5/lib-dynload/__pycache__
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share/man
Creating directory /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share/man/man1
/usr/bin/install -c -m 644 ./Misc/python.man \
		/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share/man/man1/python3.5.1
if test -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3 -o -h /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3; \
	then rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3; \
	else true; \
	fi
(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin; ln -s python3.5 python3)
if test "3.5" != "3.5m"; then \
		rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3.5-config; \
		(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin; ln -s python3.5m-config python3.5-config); \
		rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/pkgconfig/python-3.5m.pc; \
		(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/pkgconfig; ln -s python-3.5.pc python-3.5m.pc); \
	fi
rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3-config
(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin; ln -s python3.5-config python3-config)
rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/pkgconfig/python3.pc
(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/lib/pkgconfig; ln -s python-3.5.pc python3.pc)
rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/idle3
(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin; ln -s idle3.5 idle3)
rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/pydoc3
(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin; ln -s pydoc3.5 pydoc3)
rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/2to3
(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin; ln -s 2to3-3.5 2to3)
rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/pyvenv
(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin; ln -s pyvenv-3.5 pyvenv)
if test "x" != "x" ; then \
		rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3-32; \
		(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin; ln -s python3.5-32 python3-32) \
	fi
rm -f /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share/man/man1/python3.1
(cd /exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share/man/man1; ln -s python3.5.1 python3.1)
if test "xno" != "xno"  ; then \
		case no in \
			upgrade) ensurepip="--upgrade" ;; \
			install|*) ensurepip="" ;; \
		esac; \
		LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R ./python -E -m ensurepip \
			$ensurepip --root=/ ; \
	fi

Sat Sep 26 17:11:49 -0500 2015

make

/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Programs/python.o ./Programs/python.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/acceler.o Parser/acceler.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/grammar1.o Parser/grammar1.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/listnode.o Parser/listnode.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/node.o Parser/node.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/parser.o Parser/parser.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/bitset.o Parser/bitset.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/metagrammar.o Parser/metagrammar.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/firstsets.o Parser/firstsets.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/grammar.o Parser/grammar.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/pgen.o Parser/pgen.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/myreadline.o Parser/myreadline.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/parsetok.o Parser/parsetok.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Parser/tokenizer.o Parser/tokenizer.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/abstract.o Objects/abstract.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/accu.o Objects/accu.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/boolobject.o Objects/boolobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/bytes_methods.o Objects/bytes_methods.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/bytearrayobject.o Objects/bytearrayobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/bytesobject.o Objects/bytesobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/cellobject.o Objects/cellobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/classobject.o Objects/classobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/codeobject.o Objects/codeobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/complexobject.o Objects/complexobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/descrobject.o Objects/descrobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/enumobject.o Objects/enumobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/exceptions.o Objects/exceptions.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/genobject.o Objects/genobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/fileobject.o Objects/fileobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/floatobject.o Objects/floatobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/frameobject.o Objects/frameobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/funcobject.o Objects/funcobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/iterobject.o Objects/iterobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/listobject.o Objects/listobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/longobject.o Objects/longobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/dictobject.o Objects/dictobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/odictobject.o Objects/odictobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/memoryobject.o Objects/memoryobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/methodobject.o Objects/methodobject.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Objects/moduleobject.o Objects/moduleobject.c
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/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/random.o Python/random.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/structmember.o Python/structmember.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE \
		-DABIFLAGS='"m"' \
		-o Python/sysmodule.o ./Python/sysmodule.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/traceback.o Python/traceback.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/getopt.o Python/getopt.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/pystrcmp.o Python/pystrcmp.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/pystrtod.o Python/pystrtod.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/pystrhex.o Python/pystrhex.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/dtoa.o Python/dtoa.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/formatter_unicode.o Python/formatter_unicode.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/fileutils.o Python/fileutils.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE \
		-DSOABI='"cpython-35m-x86_64-linux-gnu"' \
		-o Python/dynload_shlib.o ./Python/dynload_shlib.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/thread.o Python/thread.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Modules/config.o Modules/config.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -DPYTHONPATH='":plat-linux"' \
		-DPREFIX='"/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0"' \
		-DEXEC_PREFIX='"/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0"' \
		-DVERSION='"3.5"' \
		-DVPATH='""' \
		-o Modules/getpath.o ./Modules/getpath.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Modules/main.o Modules/main.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Modules/gcmodule.o Modules/gcmodule.c
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/_threadmodule.c -o Modules/_threadmodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/signalmodule.c -o Modules/signalmodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/posixmodule.c -o Modules/posixmodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/errnomodule.c -o Modules/errnomodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/pwdmodule.c -o Modules/pwdmodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/_sre.c -o Modules/_sre.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/_codecsmodule.c -o Modules/_codecsmodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/_weakref.c -o Modules/_weakref.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/_functoolsmodule.c -o Modules/_functoolsmodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/_operator.c -o Modules/_operator.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/_collectionsmodule.c -o Modules/_collectionsmodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/itertoolsmodule.c -o Modules/itertoolsmodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/atexitmodule.c -o Modules/atexitmodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/_stat.c -o Modules/_stat.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/timemodule.c -o Modules/timemodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/_localemodule.c -o Modules/_localemodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -I./Modules/_io -c ./Modules/_io/_iomodule.c -o Modules/_iomodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -I./Modules/_io -c ./Modules/_io/iobase.c -o Modules/iobase.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -I./Modules/_io -c ./Modules/_io/fileio.c -o Modules/fileio.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -I./Modules/_io -c ./Modules/_io/bytesio.c -o Modules/bytesio.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -I./Modules/_io -c ./Modules/_io/bufferedio.c -o Modules/bufferedio.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -I./Modules/_io -c ./Modules/_io/textio.c -o Modules/textio.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -I./Modules/_io -c ./Modules/_io/stringio.c -o Modules/stringio.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/zipimport.c -o Modules/zipimport.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/faulthandler.c -o Modules/faulthandler.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/_tracemalloc.c -o Modules/_tracemalloc.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/hashtable.c -o Modules/hashtable.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/symtablemodule.c -o Modules/symtablemodule.o
/usr/bin/gcc-4.4 -pthread -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE  -c ./Modules/xxsubtype.c -o Modules/xxsubtype.o
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Programs/_freeze_importlib.o Programs/_freeze_importlib.c
/usr/bin/install -c -m 644 ./Tools/gdb/libpython.py python-gdb.py
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Programs/_testembed.o ./Programs/_testembed.c
# Substitution happens here, as the completely-expanded BINDIR
# is not available in configure
sed -e "s,@EXENAME@,/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3.5m," < ./Misc/python-config.in >python-config.py
# Replace makefile compat. variable references with shell script compat. ones;  -> 
sed -e 's,\$(\([A-Za-z0-9_]*\)),\$\{\1\},g' < Misc/python-config.sh >python-config
# On Darwin, always use the python version of the script, the shell
# version doesn't use the compiler customizations that are provided
# in python (_osx_support.py).
if test `uname -s` = Darwin; then \
		cp python-config.py python-config; \
	fi
/usr/bin/gcc-4.4 -pthread -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib Parser/acceler.o Parser/grammar1.o Parser/listnode.o Parser/node.o Parser/parser.o Parser/bitset.o Parser/metagrammar.o Parser/firstsets.o Parser/grammar.o Parser/pgen.o Objects/obmalloc.o Python/dynamic_annotations.o Python/mysnprintf.o Python/pyctype.o Parser/tokenizer_pgen.o Parser/printgrammar.o Parser/parsetok_pgen.o Parser/pgenmain.o -lpthread -ldl  -lutil -lrt -o Parser/pgen
Parser/pgen ./Grammar/Grammar Include/graminit.h Python/graminit.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/ast.o Python/ast.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/compile.o Python/compile.c
touch Python/graminit.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/symtable.o Python/symtable.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/graminit.o Python/graminit.c
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE \
	      -DHGVERSION="\"`LC_ALL=C `\"" \
	      -DHGTAG="\"`LC_ALL=C `\"" \
	      -DHGBRANCH="\"`LC_ALL=C `\"" \
	      -o Modules/getbuildinfo.o ./Modules/getbuildinfo.c
/usr/bin/gcc-4.4 -pthread -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -o Programs/_freeze_importlib Programs/_freeze_importlib.o Modules/getbuildinfo.o Parser/acceler.o Parser/grammar1.o Parser/listnode.o Parser/node.o Parser/parser.o Parser/bitset.o Parser/metagrammar.o Parser/firstsets.o Parser/grammar.o Parser/pgen.o Parser/myreadline.o Parser/parsetok.o Parser/tokenizer.o Objects/abstract.o Objects/accu.o Objects/boolobject.o Objects/bytes_methods.o Objects/bytearrayobject.o Objects/bytesobject.o Objects/cellobject.o Objects/classobject.o Objects/codeobject.o Objects/complexobject.o Objects/descrobject.o Objects/enumobject.o Objects/exceptions.o Objects/genobject.o Objects/fileobject.o Objects/floatobject.o Objects/frameobject.o Objects/funcobject.o Objects/iterobject.o Objects/listobject.o Objects/longobject.o Objects/dictobject.o Objects/odictobject.o Objects/memoryobject.o Objects/methodobject.o Objects/moduleobject.o Objects/namespaceobject.o Objects/object.o Objects/obmalloc.o Objects/capsule.o Objects/rangeobject.o Objects/setobject.o Objects/sliceobject.o Objects/structseq.o Objects/tupleobject.o Objects/typeobject.o Objects/unicodeobject.o Objects/unicodectype.o Objects/weakrefobject.o Python/_warnings.o Python/Python-ast.o Python/asdl.o Python/ast.o Python/bltinmodule.o Python/ceval.o Python/compile.o Python/codecs.o Python/dynamic_annotations.o Python/errors.o Python/frozenmain.o Python/future.o Python/getargs.o Python/getcompiler.o Python/getcopyright.o Python/getplatform.o Python/getversion.o Python/graminit.o Python/import.o Python/importdl.o Python/marshal.o Python/modsupport.o Python/mystrtoul.o Python/mysnprintf.o Python/peephole.o Python/pyarena.o Python/pyctype.o Python/pyfpe.o Python/pyhash.o Python/pylifecycle.o Python/pymath.o Python/pystate.o Python/pythonrun.o Python/pytime.o Python/random.o Python/structmember.o Python/symtable.o Python/sysmodule.o Python/traceback.o Python/getopt.o Python/pystrcmp.o Python/pystrtod.o Python/pystrhex.o Python/dtoa.o Python/formatter_unicode.o Python/fileutils.o Python/dynload_shlib.o   Python/thread.o Modules/config.o Modules/getpath.o Modules/main.o Modules/gcmodule.o  Modules/_threadmodule.o  Modules/signalmodule.o  Modules/posixmodule.o  Modules/errnomodule.o  Modules/pwdmodule.o  Modules/_sre.o  Modules/_codecsmodule.o  Modules/_weakref.o  Modules/_functoolsmodule.o  Modules/_operator.o  Modules/_collectionsmodule.o  Modules/itertoolsmodule.o  Modules/atexitmodule.o  Modules/_stat.o  Modules/timemodule.o  Modules/_localemodule.o  Modules/_iomodule.o Modules/iobase.o Modules/fileio.o Modules/bytesio.o Modules/bufferedio.o Modules/textio.o Modules/stringio.o  Modules/zipimport.o  Modules/faulthandler.o  Modules/_tracemalloc.o Modules/hashtable.o  Modules/symtablemodule.o  Modules/xxsubtype.o -lpthread -ldl  -lutil -lrt   -lm  
./Programs/_freeze_importlib \
		./Lib/importlib/_bootstrap.py Python/importlib.h
./Programs/_freeze_importlib \
		./Lib/importlib/_bootstrap_external.py Python/importlib_external.h
Could not find platform dependent libraries <exec_prefix>
Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>]
Could not find platform dependent libraries <exec_prefix>
Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>]
/usr/bin/gcc-4.4 -pthread -c -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2  -Werror=declaration-after-statement   -I. -IInclude -I./Include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -isystem/exports/people/andersenlab/dec211/.linuxbrew/include -fPIC -DPy_BUILD_CORE -o Python/frozen.o Python/frozen.c
rm -f libpython3.5m.a
if test libpython3.5m.so.1.0 != libpython3.5m.so; then \
		/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-hlibpython3.5m.so.1.0 -o libpython3.5m.so.1.0 Modules/getbuildinfo.o Parser/acceler.o Parser/grammar1.o Parser/listnode.o Parser/node.o Parser/parser.o Parser/bitset.o Parser/metagrammar.o Parser/firstsets.o Parser/grammar.o Parser/pgen.o Parser/myreadline.o Parser/parsetok.o Parser/tokenizer.o Objects/abstract.o Objects/accu.o Objects/boolobject.o Objects/bytes_methods.o Objects/bytearrayobject.o Objects/bytesobject.o Objects/cellobject.o Objects/classobject.o Objects/codeobject.o Objects/complexobject.o Objects/descrobject.o Objects/enumobject.o Objects/exceptions.o Objects/genobject.o Objects/fileobject.o Objects/floatobject.o Objects/frameobject.o Objects/funcobject.o Objects/iterobject.o Objects/listobject.o Objects/longobject.o Objects/dictobject.o Objects/odictobject.o Objects/memoryobject.o Objects/methodobject.o Objects/moduleobject.o Objects/namespaceobject.o Objects/object.o Objects/obmalloc.o Objects/capsule.o Objects/rangeobject.o Objects/setobject.o Objects/sliceobject.o Objects/structseq.o Objects/tupleobject.o Objects/typeobject.o Objects/unicodeobject.o Objects/unicodectype.o Objects/weakrefobject.o Python/_warnings.o Python/Python-ast.o Python/asdl.o Python/ast.o Python/bltinmodule.o Python/ceval.o Python/compile.o Python/codecs.o Python/dynamic_annotations.o Python/errors.o Python/frozenmain.o Python/future.o Python/getargs.o Python/getcompiler.o Python/getcopyright.o Python/getplatform.o Python/getversion.o Python/graminit.o Python/import.o Python/importdl.o Python/marshal.o Python/modsupport.o Python/mystrtoul.o Python/mysnprintf.o Python/peephole.o Python/pyarena.o Python/pyctype.o Python/pyfpe.o Python/pyhash.o Python/pylifecycle.o Python/pymath.o Python/pystate.o Python/pythonrun.o Python/pytime.o Python/random.o Python/structmember.o Python/symtable.o Python/sysmodule.o Python/traceback.o Python/getopt.o Python/pystrcmp.o Python/pystrtod.o Python/pystrhex.o Python/dtoa.o Python/formatter_unicode.o Python/fileutils.o Python/dynload_shlib.o   Python/thread.o Modules/config.o Modules/getpath.o Modules/main.o Modules/gcmodule.o  Modules/_threadmodule.o  Modules/signalmodule.o  Modules/posixmodule.o  Modules/errnomodule.o  Modules/pwdmodule.o  Modules/_sre.o  Modules/_codecsmodule.o  Modules/_weakref.o  Modules/_functoolsmodule.o  Modules/_operator.o  Modules/_collectionsmodule.o  Modules/itertoolsmodule.o  Modules/atexitmodule.o  Modules/_stat.o  Modules/timemodule.o  Modules/_localemodule.o  Modules/_iomodule.o Modules/iobase.o Modules/fileio.o Modules/bytesio.o Modules/bufferedio.o Modules/textio.o Modules/stringio.o  Modules/zipimport.o  Modules/faulthandler.o  Modules/_tracemalloc.o Modules/hashtable.o  Modules/symtablemodule.o  Modules/xxsubtype.o Python/frozen.o   -lpthread -ldl  -lutil -lrt  -lm ; \
		ln -f libpython3.5m.so.1.0 libpython3.5m.so; \
	else \
		/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -o libpython3.5m.so Modules/getbuildinfo.o Parser/acceler.o Parser/grammar1.o Parser/listnode.o Parser/node.o Parser/parser.o Parser/bitset.o Parser/metagrammar.o Parser/firstsets.o Parser/grammar.o Parser/pgen.o Parser/myreadline.o Parser/parsetok.o Parser/tokenizer.o Objects/abstract.o Objects/accu.o Objects/boolobject.o Objects/bytes_methods.o Objects/bytearrayobject.o Objects/bytesobject.o Objects/cellobject.o Objects/classobject.o Objects/codeobject.o Objects/complexobject.o Objects/descrobject.o Objects/enumobject.o Objects/exceptions.o Objects/genobject.o Objects/fileobject.o Objects/floatobject.o Objects/frameobject.o Objects/funcobject.o Objects/iterobject.o Objects/listobject.o Objects/longobject.o Objects/dictobject.o Objects/odictobject.o Objects/memoryobject.o Objects/methodobject.o Objects/moduleobject.o Objects/namespaceobject.o Objects/object.o Objects/obmalloc.o Objects/capsule.o Objects/rangeobject.o Objects/setobject.o Objects/sliceobject.o Objects/structseq.o Objects/tupleobject.o Objects/typeobject.o Objects/unicodeobject.o Objects/unicodectype.o Objects/weakrefobject.o Python/_warnings.o Python/Python-ast.o Python/asdl.o Python/ast.o Python/bltinmodule.o Python/ceval.o Python/compile.o Python/codecs.o Python/dynamic_annotations.o Python/errors.o Python/frozenmain.o Python/future.o Python/getargs.o Python/getcompiler.o Python/getcopyright.o Python/getplatform.o Python/getversion.o Python/graminit.o Python/import.o Python/importdl.o Python/marshal.o Python/modsupport.o Python/mystrtoul.o Python/mysnprintf.o Python/peephole.o Python/pyarena.o Python/pyctype.o Python/pyfpe.o Python/pyhash.o Python/pylifecycle.o Python/pymath.o Python/pystate.o Python/pythonrun.o Python/pytime.o Python/random.o Python/structmember.o Python/symtable.o Python/sysmodule.o Python/traceback.o Python/getopt.o Python/pystrcmp.o Python/pystrtod.o Python/pystrhex.o Python/dtoa.o Python/formatter_unicode.o Python/fileutils.o Python/dynload_shlib.o   Python/thread.o Modules/config.o Modules/getpath.o Modules/main.o Modules/gcmodule.o  Modules/_threadmodule.o  Modules/signalmodule.o  Modules/posixmodule.o  Modules/errnomodule.o  Modules/pwdmodule.o  Modules/_sre.o  Modules/_codecsmodule.o  Modules/_weakref.o  Modules/_functoolsmodule.o  Modules/_operator.o  Modules/_collectionsmodule.o  Modules/itertoolsmodule.o  Modules/atexitmodule.o  Modules/_stat.o  Modules/timemodule.o  Modules/_localemodule.o  Modules/_iomodule.o Modules/iobase.o Modules/fileio.o Modules/bytesio.o Modules/bufferedio.o Modules/textio.o Modules/stringio.o  Modules/zipimport.o  Modules/faulthandler.o  Modules/_tracemalloc.o Modules/hashtable.o  Modules/symtablemodule.o  Modules/xxsubtype.o Python/frozen.o   -lpthread -ldl  -lutil -lrt  -lm ; \
	fi
ar rc libpython3.5m.a Modules/getbuildinfo.o
ar rc libpython3.5m.a Parser/acceler.o Parser/grammar1.o Parser/listnode.o Parser/node.o Parser/parser.o Parser/bitset.o Parser/metagrammar.o Parser/firstsets.o Parser/grammar.o Parser/pgen.o Parser/myreadline.o Parser/parsetok.o Parser/tokenizer.o
ar rc libpython3.5m.a Objects/abstract.o Objects/accu.o Objects/boolobject.o Objects/bytes_methods.o Objects/bytearrayobject.o Objects/bytesobject.o Objects/cellobject.o Objects/classobject.o Objects/codeobject.o Objects/complexobject.o Objects/descrobject.o Objects/enumobject.o Objects/exceptions.o Objects/genobject.o Objects/fileobject.o Objects/floatobject.o Objects/frameobject.o Objects/funcobject.o Objects/iterobject.o Objects/listobject.o Objects/longobject.o Objects/dictobject.o Objects/odictobject.o Objects/memoryobject.o Objects/methodobject.o Objects/moduleobject.o Objects/namespaceobject.o Objects/object.o Objects/obmalloc.o Objects/capsule.o Objects/rangeobject.o Objects/setobject.o Objects/sliceobject.o Objects/structseq.o Objects/tupleobject.o Objects/typeobject.o Objects/unicodeobject.o Objects/unicodectype.o Objects/weakrefobject.o
ar rc libpython3.5m.a Python/_warnings.o Python/Python-ast.o Python/asdl.o Python/ast.o Python/bltinmodule.o Python/ceval.o Python/compile.o Python/codecs.o Python/dynamic_annotations.o Python/errors.o Python/frozenmain.o Python/future.o Python/getargs.o Python/getcompiler.o Python/getcopyright.o Python/getplatform.o Python/getversion.o Python/graminit.o Python/import.o Python/importdl.o Python/marshal.o Python/modsupport.o Python/mystrtoul.o Python/mysnprintf.o Python/peephole.o Python/pyarena.o Python/pyctype.o Python/pyfpe.o Python/pyhash.o Python/pylifecycle.o Python/pymath.o Python/pystate.o Python/pythonrun.o Python/pytime.o Python/random.o Python/structmember.o Python/symtable.o Python/sysmodule.o Python/traceback.o Python/getopt.o Python/pystrcmp.o Python/pystrtod.o Python/pystrhex.o Python/dtoa.o Python/formatter_unicode.o Python/fileutils.o Python/dynload_shlib.o   Python/thread.o Python/frozen.o
ar rc libpython3.5m.a Modules/config.o Modules/getpath.o Modules/main.o Modules/gcmodule.o 
ar rc libpython3.5m.a Modules/_threadmodule.o  Modules/signalmodule.o  Modules/posixmodule.o  Modules/errnomodule.o  Modules/pwdmodule.o  Modules/_sre.o  Modules/_codecsmodule.o  Modules/_weakref.o  Modules/_functoolsmodule.o  Modules/_operator.o  Modules/_collectionsmodule.o  Modules/itertoolsmodule.o  Modules/atexitmodule.o  Modules/_stat.o  Modules/timemodule.o  Modules/_localemodule.o  Modules/_iomodule.o Modules/iobase.o Modules/fileio.o Modules/bytesio.o Modules/bufferedio.o Modules/textio.o Modules/stringio.o  Modules/zipimport.o  Modules/faulthandler.o  Modules/_tracemalloc.o Modules/hashtable.o  Modules/symtablemodule.o  Modules/xxsubtype.o
ranlib libpython3.5m.a
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,--no-as-needed -o libpython3.so -Wl,-hlibpython3.so libpython3.5m.so
/usr/bin/gcc-4.4 -pthread -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Xlinker -export-dynamic -o python Programs/python.o -L. -lpython3.5m -lpthread -ldl  -lutil -lrt   -lm  
/usr/bin/gcc-4.4 -pthread -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Xlinker -export-dynamic -o Programs/_testembed Programs/_testembed.o -L. -lpython3.5m -lpthread -ldl  -lutil -lrt   -lm  
LD_LIBRARY_PATH=/tmp/python320150926-22541-nepcft/Python-3.5.0:/usr/bin/R ./python -E -S -m sysconfig --generate-posix-vars ;\
	if test $? -ne 0 ; then \
		echo "generate-posix-vars failed" ; \
		rm -f ./pybuilddir.txt ; \
		exit 1 ; \
	fi
running build
running build_ext
ldd: /exports/people/andersenlab/dec211/.linuxbrew/opt/readline/lib/libhistory.dylib: No such file or directory
INFO: Can't locate Tcl/Tk libs and/or headers
building '_struct' extension
building '_ctypes_test' extension
building 'array' extension
creating build/temp.linux-x86_64-3.5/tmp
building 'cmath' extension
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft
building 'math' extension
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0
building '_bisect' extension
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules
building '_datetime' extension
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_bisectmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_bisectmodule.o
building '_random' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/mathmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/mathmodule.o
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_datetimemodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_datetimemodule.o
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/arraymodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/arraymodule.o
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_struct.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_struct.o
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cmathmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cmathmodule.o
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_randommodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_randommodule.o
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/_ctypes_test.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/_ctypes_test.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_bisectmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_bisect.cpython-35m-x86_64-linux-gnu.so
building '_heapq' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_heapqmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_heapqmodule.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_randommodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_random.cpython-35m-x86_64-linux-gnu.so
building '_pickle' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_pickle.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_pickle.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/_ctypes_test.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_ctypes_test.cpython-35m-x86_64-linux-gnu.so
building '_json' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_json.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_json.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_heapqmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_heapq.cpython-35m-x86_64-linux-gnu.so
building '_testcapi' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testcapimodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testcapimodule.o
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_math.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_math.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_struct.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_struct.cpython-35m-x86_64-linux-gnu.so
building '_testbuffer' extension
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/mathmodule.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_math.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lm -lpython3.5m -o build/lib.linux-x86_64-3.5/math.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testbuffer.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testbuffer.o
building '_testimportmultiple' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testimportmultiple.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testimportmultiple.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testimportmultiple.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_testimportmultiple.cpython-35m-x86_64-linux-gnu.so
building '_testmultiphase' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testmultiphase.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testmultiphase.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/arraymodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/array.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testmultiphase.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_testmultiphase.cpython-35m-x86_64-linux-gnu.so
building '_lsprof' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_lsprof.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_lsprof.o
building 'unicodedata' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/unicodedata.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/unicodedata.o
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_math.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_math.o
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/rotatingtree.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/rotatingtree.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_json.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_json.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cmathmodule.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_math.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lm -lpython3.5m -o build/lib.linux-x86_64-3.5/cmath.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_lsprof.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/rotatingtree.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_lsprof.cpython-35m-x86_64-linux-gnu.so
building '_opcode' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_opcode.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_opcode.o
building 'fcntl' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/fcntlmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/fcntlmodule.o
building 'grp' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/grpmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/grpmodule.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testbuffer.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_testbuffer.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_opcode.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_opcode.cpython-35m-x86_64-linux-gnu.so
building 'spwd' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/spwdmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/spwdmodule.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_datetimemodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_datetime.cpython-35m-x86_64-linux-gnu.so
building 'select' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/selectmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/selectmodule.o
building 'parser' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/parsermodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/parsermodule.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/grpmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/grp.cpython-35m-x86_64-linux-gnu.so
building 'mmap' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/mmapmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/mmapmodule.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/fcntlmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/fcntl.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/spwdmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/spwd.cpython-35m-x86_64-linux-gnu.so
building 'syslog' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/syslogmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/syslogmodule.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_testcapimodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_testcapi.cpython-35m-x86_64-linux-gnu.so
building 'audioop' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/audioop.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/audioop.o
building 'readline' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/readline.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/readline.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/syslogmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/syslog.cpython-35m-x86_64-linux-gnu.so
building '_crypt' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_cryptmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_cryptmodule.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/selectmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/select.cpython-35m-x86_64-linux-gnu.so
building '_csv' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_csv.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_csv.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_cryptmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lcrypt -lpython3.5m -o build/lib.linux-x86_64-3.5/_crypt.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/mmapmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/mmap.cpython-35m-x86_64-linux-gnu.so
building '_posixsubprocess' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_posixsubprocess.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_posixsubprocess.o
building '_socket' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/socketmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/socketmodule.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/readline.o -L/usr/lib/termcap -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lreadline -lncursesw -lpython3.5m -o build/lib.linux-x86_64-3.5/readline.cpython-35m-x86_64-linux-gnu.so
building '_ssl' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ssl.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ssl.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_posixsubprocess.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_posixsubprocess.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_pickle.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_pickle.cpython-35m-x86_64-linux-gnu.so
building '_hashlib' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_hashopenssl.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_hashopenssl.o
building '_sha256' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/sha256module.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/sha256module.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/audioop.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/audioop.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_csv.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_csv.cpython-35m-x86_64-linux-gnu.so
building '_sha512' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/sha512module.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/sha512module.o
building '_md5' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/md5module.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/md5module.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_hashopenssl.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lssl -lcrypto -lpython3.5m -o build/lib.linux-x86_64-3.5/_hashlib.cpython-35m-x86_64-linux-gnu.so
building '_sha1' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/sha1module.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/sha1module.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/parsermodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/parser.cpython-35m-x86_64-linux-gnu.so
building '_gdbm' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/md5module.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_md5.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/sha256module.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_sha256.cpython-35m-x86_64-linux-gnu.so
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:12:18: error: gdbm.h: No such file or directory
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:40: error: expected specifier-qualifier-list before ‘GDBM_FILE’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘newdbmobject’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:76: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:80: error: ‘gdbm_errno’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:80: error: (Each undeclared identifier is reported only once
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:80: error: for each function it appears in.)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_dealloc’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:92: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:93: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_length’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:100: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:105: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:105: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:107: error: ‘okey’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:111: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:111: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:112: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_subscript’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:126: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:126: error: expected ‘;’ before ‘drec’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:128: error: ‘krec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:131: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:136: error: ‘drec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:136: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_ass_sub’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:174: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:174: error: expected ‘;’ before ‘krec’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:176: error: ‘krec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:181: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:188: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:194: error: ‘drec’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:200: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:200: error: ‘GDBM_REPLACE’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:205: error: ‘gdbm_errno’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_close_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:255: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:256: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:257: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_keys_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:274: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:274: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:281: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:287: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:287: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:302: error: ‘nextkey’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:302: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbm_contains’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:313: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:313: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:316: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:322: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:337: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_firstkey_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:368: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:368: error: expected ‘;’ before ‘key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:370: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:371: error: ‘key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:371: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_nextkey_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:406: error: ‘datum’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:406: error: expected ‘;’ before ‘dbm_key’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:408: error: ‘dbm_key’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:410: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:411: error: ‘nextkey’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:411: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_reorganize_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:439: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:441: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:445: error: ‘gdbm_errno’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘_gdbm_gdbm_sync_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:465: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:466: error: ‘dbmobject’ has no member named ‘di_dbm’
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c: In function ‘dbmopen_impl’:
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:573: error: ‘GDBM_READER’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:576: error: ‘GDBM_WRITER’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:579: error: ‘GDBM_WRCREAT’ undeclared (first use in this function)
/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_gdbmmodule.c:582: error: ‘GDBM_NEWDB’ undeclared (first use in this function)
building 'termios' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/termios.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/termios.o
building 'resource' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/resource.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/resource.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/sha1module.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_sha1.cpython-35m-x86_64-linux-gnu.so
building 'nis' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/nismodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/nismodule.o
building '_curses' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DHAVE_NCURSESW=1 -I/usr/include/ncursesw -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_cursesmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_cursesmodule.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/resource.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/resource.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/termios.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/termios.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/unicodedata.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/unicodedata.cpython-35m-x86_64-linux-gnu.so
building '_curses_panel' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DHAVE_NCURSESW=1 -I/usr/include/ncursesw -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_curses_panel.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_curses_panel.o
building 'zlib' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/zlibmodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/zlibmodule.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/sha512module.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_sha512.cpython-35m-x86_64-linux-gnu.so
building 'binascii' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/binascii.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/binascii.o -DUSE_ZLIB_CRC32
building '_bz2' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_bz2module.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_bz2module.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/nismodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lnsl -lpython3.5m -o build/lib.linux-x86_64-3.5/nis.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/socketmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_socket.cpython-35m-x86_64-linux-gnu.so
building '_lzma' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_lzmamodule.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_lzmamodule.o
building 'pyexpat' extension
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DHAVE_EXPAT_CONFIG_H=1 -DUSE_PYEXPAT_CAPI -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/pyexpat.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/pyexpat.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_curses_panel.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpanelw -lncursesw -lpython3.5m -o build/lib.linux-x86_64-3.5/_curses_panel.cpython-35m-x86_64-linux-gnu.so
building '_elementtree' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DHAVE_EXPAT_CONFIG_H=1 -DUSE_PYEXPAT_CAPI -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_elementtree.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_elementtree.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_bz2module.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lbz2 -lpython3.5m -o build/lib.linux-x86_64-3.5/_bz2.cpython-35m-x86_64-linux-gnu.so
building '_multibytecodec' extension
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/multibytecodec.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/multibytecodec.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ssl.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lssl -lcrypto -lpython3.5m -o build/lib.linux-x86_64-3.5/_ssl.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/zlibmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lz -lpython3.5m -o build/lib.linux-x86_64-3.5/zlib.cpython-35m-x86_64-linux-gnu.so
building '_codecs_kr' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_kr.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_kr.o
building '_codecs_jp' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_jp.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_jp.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/binascii.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lz -lpython3.5m -o build/lib.linux-x86_64-3.5/binascii.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_lzmamodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -llzma -lpython3.5m -o build/lib.linux-x86_64-3.5/_lzma.cpython-35m-x86_64-linux-gnu.so
building '_codecs_cn' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_cn.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_cn.o
building '_codecs_tw' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_tw.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_tw.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_tw.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_codecs_tw.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/multibytecodec.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_multibytecodec.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_kr.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_codecs_kr.cpython-35m-x86_64-linux-gnu.so
building '_codecs_hk' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_hk.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_hk.o
building '_codecs_iso2022' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_iso2022.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_iso2022.o
building '_decimal' extension
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/_decimal.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/_decimal.o -Wextra -Wno-missing-field-initializers
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_cn.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_codecs_cn.cpython-35m-x86_64-linux-gnu.so
building '_multiprocessing' extension
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_multiprocessing
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -IModules/_multiprocessing -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_multiprocessing/multiprocessing.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_multiprocessing/multiprocessing.o
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DHAVE_EXPAT_CONFIG_H=1 -DUSE_PYEXPAT_CAPI -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat/xmlparse.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat/xmlparse.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_cursesmodule.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lncursesw -lpython3.5m -o build/lib.linux-x86_64-3.5/_curses.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -IModules/_multiprocessing -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_multiprocessing/semaphore.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_multiprocessing/semaphore.o
building 'ossaudiodev' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/ossaudiodev.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/ossaudiodev.o
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_jp.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_codecs_jp.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_hk.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_codecs_hk.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/cjkcodecs/_codecs_iso2022.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_codecs_iso2022.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_multiprocessing/multiprocessing.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_multiprocessing/semaphore.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_multiprocessing.cpython-35m-x86_64-linux-gnu.so
building 'xxlimited' extension
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DPy_LIMITED_API=0x03050000 -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/xxlimited.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/xxlimited.o
creating build/temp.linux-x86_64-3.5/libffi
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/xxlimited.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/xxlimited.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_elementtree.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_elementtree.cpython-35m-x86_64-linux-gnu.so
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking target system type... x86_64-unknown-linux-gnu
checking for gsed... sed
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/ossaudiodev.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/ossaudiodev.cpython-35m-x86_64-linux-gnu.so
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... /usr/bin/gcc-4.4 -pthread
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/gcc-4.4 -pthread accepts -g... yes
checking for /usr/bin/gcc-4.4 -pthread option to accept ISO C89... none needed
checking for style of include used by make... GNU
checking dependency style of /usr/bin/gcc-4.4 -pthread... gcc3
checking whether we are using the GNU C++ compiler... yes
checking whether /usr/bin/g++-4.4 -pthread accepts -g... yes
checking dependency style of /usr/bin/g++-4.4 -pthread... gcc3
checking dependency style of /usr/bin/gcc-4.4 -pthread... gcc3
checking whether /usr/bin/gcc-4.4 -pthread and cc understand -c and -o together... yes
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by /usr/bin/gcc-4.4 -pthread... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 3458764513820540925
checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from /usr/bin/gcc-4.4 -pthread object... ok
checking for sysroot... no
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DHAVE_EXPAT_CONFIG_H=1 -DUSE_PYEXPAT_CAPI -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat/xmlrole.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat/xmlrole.o
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... /usr/bin/gcc-4.4 -pthread -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... /usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DHAVE_EXPAT_CONFIG_H=1 -DUSE_PYEXPAT_CAPI -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat/xmltok.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat/xmltok.o
yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if /usr/bin/gcc-4.4 -pthread supports -fno-rtti -fno-exceptions... no
checking for /usr/bin/gcc-4.4 -pthread option to produce PIC... -fPIC -DPIC
checking if /usr/bin/gcc-4.4 -pthread PIC flag -fPIC -DPIC works... yes
checking if /usr/bin/gcc-4.4 -pthread static flag -static works... /usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/basearith.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/basearith.o -Wextra -Wno-missing-field-initializers
yes
checking if /usr/bin/gcc-4.4 -pthread supports -c -o file.o... yes
checking if /usr/bin/gcc-4.4 -pthread supports -c -o file.o... (cached) yes
checking whether the /usr/bin/gcc-4.4 -pthread linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... /usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/constants.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/constants.o -Wextra -Wno-missing-field-initializers
/usr/bin/g++-4.4 -pthread -E
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/context.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/context.o -Wextra -Wno-missing-field-initializers
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/convolute.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/convolute.o -Wextra -Wno-missing-field-initializers
checking for ld used by /usr/bin/g++-4.4 -pthread... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the /usr/bin/g++-4.4 -pthread linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/crt.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/crt.o -Wextra -Wno-missing-field-initializers
checking for /usr/bin/g++-4.4 -pthread option to produce PIC... -fPIC -DPIC
checking if /usr/bin/g++-4.4 -pthread PIC flag -fPIC -DPIC works... yes
checking if /usr/bin/g++-4.4 -pthread static flag -static works... /usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/difradix2.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/difradix2.o -Wextra -Wno-missing-field-initializers
yes
checking if /usr/bin/g++-4.4 -pthread supports -c -o file.o... /usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/fnt.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/fnt.o -Wextra -Wno-missing-field-initializers
yes
checking if /usr/bin/g++-4.4 -pthread supports -c -o file.o... (cached) yes
checking whether the /usr/bin/g++-4.4 -pthread linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking size of size_t... /usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/fourstep.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/fourstep.o -Wextra -Wno-missing-field-initializers
8
checking for C compiler vendor... /usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/io.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/io.o -Wextra -Wno-missing-field-initializers
gnu
checking CFLAGS for maximum warnings... -Wall
checking whether to enable maintainer-specific portions of Makefiles... no
checking sys/mman.h usability... yes
checking sys/mman.h presence... yes
checking for sys/mman.h... yes
checking for mmap... yes
checking for sys/mman.h... (cached) yes
checking for mmap... (cached) yes
checking whether read-only mmap of a plain file works... yes
checking whether mmap from /dev/zero works... yes
checking for MAP_ANON(YMOUS)... yes
checking whether mmap with MAP_ANON(YMOUS) works... yes
checking for ANSI C header files... (cached) yes
checking for memcpy... yes
checking for size_t... /usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/memory.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/memory.o -Wextra -Wno-missing-field-initializers
yes
checking for working alloca.h... /usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/mpdecimal.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/mpdecimal.o -Wextra -Wno-missing-field-initializers
yes
checking for alloca... yes
checking size of double... 8
checking size of long double... 16
checking whether byte ordering is bigendian... no
checking assembler .cfi pseudo-op support... /usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/pyexpat.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat/xmlparse.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat/xmlrole.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/expat/xmltok.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/pyexpat.cpython-35m-x86_64-linux-gnu.so
yes
checking assembler supports pc related relocs... yes
checking assembler .ascii pseudo-op support... yes
checking assembler .string pseudo-op support... yes
checking for _ prefix in compiled symbols... no
checking toolchain supports unwind section type... yes
checking whether .eh_frame section should be read-only... yes
checking for __attribute__((visibility("hidden")))... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating include/Makefile
config.status: creating include/ffi.h
config.status: creating Makefile
config.status: creating testsuite/Makefile
config.status: creating man/Makefile
config.status: creating libffi.pc
config.status: creating fficonfig.py
config.status: creating fficonfig.h
config.status: linking /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/ffitarget.h to include/ffitarget.h
config.status: linking /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/include/ffi_common.h to include/ffi_common.h
config.status: executing buildir commands
config.status: skipping top_srcdir/Makefile - not created
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing include commands
config.status: executing src commands
building '_ctypes' extension
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src
creating build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -Ibuild/temp.linux-x86_64-3.5/libffi/include -Ibuild/temp.linux-x86_64-3.5/libffi -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/_ctypes.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/_ctypes.o -Wall -fexceptions
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/numbertheory.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/numbertheory.o -Wextra -Wno-missing-field-initializers
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/sixstep.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/sixstep.o -Wextra -Wno-missing-field-initializers
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -DCONFIG_64=1 -DASM=1 -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/transpose.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/transpose.o -Wextra -Wno-missing-field-initializers
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/_decimal.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/basearith.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/constants.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/context.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/convolute.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/crt.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/difradix2.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/fnt.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/fourstep.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/io.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/memory.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/mpdecimal.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/numbertheory.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/sixstep.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_decimal/libmpdec/transpose.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_decimal.cpython-35m-x86_64-linux-gnu.so
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -Ibuild/temp.linux-x86_64-3.5/libffi/include -Ibuild/temp.linux-x86_64-3.5/libffi -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/callbacks.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/callbacks.o -Wall -fexceptions
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -Ibuild/temp.linux-x86_64-3.5/libffi/include -Ibuild/temp.linux-x86_64-3.5/libffi -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/callproc.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/callproc.o -Wall -fexceptions
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -Ibuild/temp.linux-x86_64-3.5/libffi/include -Ibuild/temp.linux-x86_64-3.5/libffi -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/stgdict.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/stgdict.o -Wall -fexceptions
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -Ibuild/temp.linux-x86_64-3.5/libffi/include -Ibuild/temp.linux-x86_64-3.5/libffi -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/cfield.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/cfield.o -Wall -fexceptions
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -Ibuild/temp.linux-x86_64-3.5/libffi/include -Ibuild/temp.linux-x86_64-3.5/libffi -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/prep_cif.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/prep_cif.o -Wall -fexceptions
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -Ibuild/temp.linux-x86_64-3.5/libffi/include -Ibuild/temp.linux-x86_64-3.5/libffi -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/closures.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/closures.o -Wall -fexceptions
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -Ibuild/temp.linux-x86_64-3.5/libffi/include -Ibuild/temp.linux-x86_64-3.5/libffi -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/ffi64.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/ffi64.o -Wall -fexceptions
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -Ibuild/temp.linux-x86_64-3.5/libffi/include -Ibuild/temp.linux-x86_64-3.5/libffi -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/unix64.S -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/unix64.o -Wall -fexceptions
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -Ibuild/temp.linux-x86_64-3.5/libffi/include -Ibuild/temp.linux-x86_64-3.5/libffi -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/ffi.c -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/ffi.o -Wall -fexceptions
/usr/bin/gcc-4.4 -pthread -fPIC -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Os -w -pipe -march=core2 -Os -w -pipe -march=core2 -Werror=declaration-after-statement -Ibuild/temp.linux-x86_64-3.5/libffi/include -Ibuild/temp.linux-x86_64-3.5/libffi -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src -I./Include -I. -IInclude -I/usr/local/include -I/tmp/python320150926-22541-nepcft/Python-3.5.0/Include -I/tmp/python320150926-22541-nepcft/Python-3.5.0 -c /tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/sysv.S -o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/sysv.o -Wall -fexceptions
/usr/bin/gcc-4.4 -pthread -shared -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -L/exports/people/andersenlab/dec211/.linuxbrew/lib -Wl,-rpath,/exports/people/andersenlab/dec211/.linuxbrew/lib -Os -w -pipe -march=core2 -isystem/exports/people/andersenlab/dec211/.linuxbrew/include build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/_ctypes.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/callbacks.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/callproc.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/stgdict.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/cfield.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/prep_cif.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/closures.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/ffi64.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/unix64.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/ffi.o build/temp.linux-x86_64-3.5/tmp/python320150926-22541-nepcft/Python-3.5.0/Modules/_ctypes/libffi/src/x86/sysv.o -L. -L/exports/people/andersenlab/dec211/.linuxbrew/lib -L/usr/local/lib -lpython3.5m -o build/lib.linux-x86_64-3.5/_ctypes.cpython-35m-x86_64-linux-gnu.so
*** WARNING: renaming "_ssl" since importing it failed: build/lib.linux-x86_64-3.5/_ssl.cpython-35m-x86_64-linux-gnu.so: undefined symbol: SSLv2_method

Python build finished successfully!
The necessary bits to build these optional modules were not found:
_dbm                  _sqlite3              _tkinter           
To find the necessary bits, look in setup.py in detect_modules() for the module's name.


Failed to build these modules:
_gdbm                                                          


Following modules built successfully but were removed because they could not be imported:
_ssl                                                           

running build_scripts
creating build/scripts-3.5
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/pydoc3 -> build/scripts-3.5
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/idle3 -> build/scripts-3.5
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/2to3 -> build/scripts-3.5
copying and adjusting /tmp/python320150926-22541-nepcft/Python-3.5.0/Tools/scripts/pyvenv -> build/scripts-3.5
changing mode of build/scripts-3.5/pydoc3 from 644 to 755
changing mode of build/scripts-3.5/idle3 from 644 to 755
changing mode of build/scripts-3.5/2to3 from 644 to 755
changing mode of build/scripts-3.5/pyvenv from 644 to 755
renaming build/scripts-3.5/pydoc3 to build/scripts-3.5/pydoc3.5
renaming build/scripts-3.5/idle3 to build/scripts-3.5/idle3.5
renaming build/scripts-3.5/2to3 to build/scripts-3.5/2to3-3.5
renaming build/scripts-3.5/pyvenv to build/scripts-3.5/pyvenv-3.5

Sat Sep 26 17:19:05 -0500 2015

/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin/python3
-s
setup.py
--no-user-cfg
install
--force
--verbose
--install-scripts=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/bin
--install-lib=/exports/people/andersenlab/dec211/.linuxbrew/lib/python3.5/site-packages
--single-version-externally-managed
--record=installed.txt


HOMEBREW_VERSION: 0.9.5
ORIGIN: (none)
HEAD: (none)
Last commit: never
HOMEBREW_PREFIX: /exports/people/andersenlab/dec211/.linuxbrew
HOMEBREW_REPOSITORY: /exports/people/andersenlab/dec211/.linuxbrew
HOMEBREW_CELLAR: /exports/people/andersenlab/dec211/.linuxbrew/Cellar
HOMEBREW_BOTTLE_DOMAIN: https://linuxbrew.bintray.com
CPU: 8-core 64-bit 6
OS X: 0-x86_64
Xcode: N/A
CLT: N/A
Clang: 1.1 build 0
X11: N/A
System Ruby: 1.8.7-p302 => /usr/bin/ruby1.8
Perl: /usr/bin/perl
Python: /exports/people/andersenlab/dec211/Python-2.7.9/python
Ruby: /usr/bin/ruby => /usr/bin/ruby1.8
Java: 1.6.0_35

PATH: /exports/people/andersenlab/dec211/.linuxbrew/bin:/exports/people/andersenlab/dec211/python2/bin:/exports/people/andersenlab/dec211/bin/FastQC:/exports/people/andersenlab/dec211/bin:/exports/people/andersenlab/dec211/Python-2.7.9:/exports/people/andersenlab/dec211/.linuxbrew/bin:/exports/people/andersenlab/dec211/python2/bin:/exports/people/andersenlab/dec211/bin/FastQC:/exports/people/andersenlab/dec211/bin:/exports/people/andersenlab/dec211/Python-2.7.9:/exports/people/andersenlab/dec211/.linuxbrew/bin:/exports/people/andersenlab/dec211/python2/bin:/exports/people/andersenlab/dec211/bin/FastQC:/exports/people/andersenlab/dec211/bin:/exports/people/andersenlab/dec211/Python-2.7.9:/exports/people/andersenlab/dec211/.linuxbrew/bin:/exports/people/andersenlab/dec211/python2/bin:/exports/people/andersenlab/dec211/bin/FastQC:/exports/people/andersenlab/dec211/bin:/exports/people/andersenlab/dec211/Python-2.7.9:/exports/people/andersenlab/dec211/.linuxbrew/bin:/exports/people/andersenlab/dec211/python2/bin:/exports/people/andersenlab/dec211/bin/FastQC:/exports/people/andersenlab/dec211/bin:/exports/people/andersenlab/dec211/Python-2.7.9:/opt/python/x64/python-3.4.3/bin:/exports/people/andersenlab/dec211/.linuxbrew/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/exports/people/andersenlab/dec211/python_modules/bamsurgeon:/exports/people/andersenlab/dec211/.linuxbrew/bin:/exports/people/andersenlab/dec211/python_modules/bamsurgeon:/exports/people/andersenlab/dec211/.linuxbrew/bin:/exports/people/andersenlab/dec211/python_modules/bamsurgeon:/exports/people/andersenlab/dec211/.linuxbrew/bin:/exports/people/andersenlab/dec211/python_modules/bamsurgeon:/exports/people/andersenlab/dec211/.linuxbrew/bin:/exports/people/andersenlab/dec211/python_modules/bamsurgeon:/exports/people/andersenlab/dec211/.linuxbrew/bin:/exports/people/andersenlab/dec211/.linuxbrew/Library/ENV/scm

Sat Sep 26 17:11:28 -0500 2015

./configure
--prefix=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0
--enable-ipv6
--datarootdir=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share
--datadir=/exports/people/andersenlab/dec211/.linuxbrew/Cellar/python3/3.5.0/share
--enable-shared
--without-ensurepip
MACOSX_DEPLOYMENT_TARGET=0

checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for --enable-universalsdk... no
checking for --with-universal-archs... no
checking MACHDEP... linux
checking for --without-gcc... no
checking for gcc... /usr/bin/gcc-4.4
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/gcc-4.4 accepts -g... yes
checking for /usr/bin/gcc-4.4 option to accept ISO C89... none needed
checking how to run the C preprocessor... /usr/bin/gcc-4.4 -E
checking for grep that handles long lines and -e... /bin/grep
checking for --with-cxx-main=<compiler>... no
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