danielecook
11/30/2015 - 7:49 PM

Snakemake shortcuts

Snakemake shortcuts

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Rerun rules with code changes.

  snakemake -R `snakemake --list-code-changes`

Rerun rules with any changes

  snakemake -R `snakemake --list-version-changes --list-code-changes --list-input-changes`