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singularity run --bind $PWD/data:/data/db mongo.img --auth # run mongo db, instead of --auth insert port to prevent restriction
singularity run --bind /home/ccreanga/gatk,/illumina/sync/igenomes/Homo_sapiens/NCBI/GRCh38Decoy/Sequence/WholeGenomeFasta/:/home/ccreanga/gatk_data/data /illumina/development/singularity/gatk.simg

docker login docker-cgri.dockerhub.illumina.com
docker tag e4ae643c9055 docker-cgri.dockerhub.illumina.com/claudiu/gatk
docker push docker-cgri.dockerhub.illumina.com/claudiu/gatk
singularity pull docker://docker-cgri.dockerhub.illumina.com/claudiu/gatk
singularity shell /illumina/development/singularity/claudiu/gatk

singularity run --bind /home/ccreanga/singularity_test/:/home/ /illumina/development/singularity/dueto-reports.simg -d /home/build -i /home/demo_3.v2.sqlite
singularity pull --force docker://docker-cgri.dockerhub.illumina.com/dueto-reports
singularity shell --bind /home/ccreanga/singularity_test/:/home/ /illumina/development/singularity/dueto-reports.simg