shntnu
1/6/2017 - 5:11 PM

Process plates in parallel using cytominer_scripts and GNU parallel

Process plates in parallel using cytominer_scripts and GNU parallel

process_plates_parallel_cytominer.sh
content_copyfile_download
PLATES="52649  52650  52651  52652"

parallel --max-procs 4 \
  --results ../../scratch/process_luad \
  ./process.sh \
  --batchid TAOE014015 \
  --plate {1} --tmpdir ~/tmp ::: $PLATES